DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt6R and KATNAL2

DIOPT Version :10

Sequence 1:NP_651811.1 Gene:Rpt6R / 43635 FlyBaseID:FBgn0039788 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001340828.1 Gene:KATNAL2 / 83473 HGNCID:25387 Length:564 Species:Homo sapiens


Alignment Length:458 Identity:133/458 - (29%)
Similarity:212/458 - (46%) Gaps:100/458 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IPEGSEGFHSYYTQKISELQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLLQEQ-------- 63
            :|:.|.|    .|:::      :|:..:||.::..||...........:...|.:|.        
Human   127 LPQRSRG----KTRRM------MNDSCQNLPKINQQRPRSKTTAGKTGDTKSLNKEHPNQEVVDN 181

  Fly    64 --------GSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTIN--IKDVT-------------PS 105
                    |.:|:.:.|...:.    ..||....::|....:.  ||..|             ||
Human   182 TRLESANFGLHISRIRKDSGEE----NAHPRRGQIIDFQGLLTDAIKGATSELALNTFDHNPDPS 242

  Fly   106 SR--------VALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELP 162
            .|        :.:.:|...|..:        ||..:....|:..:..:.|||...|.:||.:..|
Human   243 ERLLKPLSAFIGMNSEMRELAAV--------VSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYP 299

  Fly   163 VKHPELFDALGITQP-KGVLLYGPPGTGKTLLARAVAHHTEC--TFIRVSGSELVQKFIGEGSRM 224
            :::|:||  .||..| ||:||||||||||||||:|||  |||  ||..:|.|.:|.|:.|:..::
Human   300 IRYPQLF--TGILSPWKGLLLYGPPGTGKTLLAKAVA--TECKTTFFNISASTIVSKWRGDSEKL 360

  Fly   225 VRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQ-RTMLELLNQLDGFEATKNIKVIMAT 288
            ||.||.:||.||||.||:||::|:.|.|.....|:.|.. |...|||.|:||...::::..::|.
Human   361 VRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAA 425

  Fly   289 NRID-VLDQALLRPGRIDRKIEFPPPNEEARLDILKIH-------SRKMNLTRGINLRKIAEEMP 345
            :.:. .||.|:||  |::::|....|:.|||..:: .|       ||.:.|...:....:::|..
Human   426 SNLPWELDCAMLR--RLEKRILVDLPSREARQAMI-YHWLPPVSKSRALELHTELEYSVLSQETE 487

  Fly   346 GASGAEVKGVCTEAGMYALRE---------------RRVH---VTQEDFEMAVSKVMMKDSEKNM 392
            |.||:::|.||.||.|..:|:               .|:.   ||..||...::..  |.|.||:
Human   488 GYSGSDIKLVCREAAMRPVRKIFDALENHQSESSDLPRIQLDIVTTADFLDVLTHT--KPSAKNL 550

  Fly   393 SIR 395
            :.|
Human   551 AQR 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6RNP_651811.1 PRK03992 21..395 CDD:179699 128/442 (29%)
KATNAL2NP_001340828.1 LisH 51..81 CDD:128913
RPT1 212..548 CDD:440835 114/352 (32%)
RecA-like_VPS4-like 282..446 CDD:410917 76/169 (45%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.