Protein Alignment Rpt6R and Shpk

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_083307.1
• Gene: Shpk / 74637
• MGIID: 1921887
• Length: 476
• Species: Mus musculus
• Alignment Length: 336
• Identity: 66/336 - (19%)
• Similarity: 113/336 - (33%)
• Gaps: 108/336 - (32%)

  Fly    65 SYIAEVVKPMDKNKV-----------LVKVHPEGKYVVDVDKTINIKDVTPSSRVAL-------- 110
            |::|.:.||.....|           |:|..||  ::...|....|:|...:....|
Mouse   133 SFLASLPKPDSHLSVATGFGCATIFWLLKNSPE--FLKSYDAAGTIQDYVVAMLCGLPRPLMSDQ 195

  Fly   111 ----------RNESY---TLHK------ILPNKVDP------------------LVSLMLVEKVP 138
                      :::|:   ||.|      :||:..:|                  .|.:.|.: :.
Mouse   196 NAASWGYFNTQSQSWNLDTLEKAGFPIHLLPDIAEPGSMAGRTSHTWFEIPKGTQVGIALGD-LQ 259

  Fly   139 DSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVA---HH 200
            .|.|..:|.....:..|...::|....|..|..|....|...:.:. |...:|.|..|.:   .:
Mouse   260 ASVYSCMGQRTDAVLNISTSVQLAASMPVGFQPLQTPDPAAPVAFF-PYFDRTYLGVAASLNGGN 323

  Fly   201 TECTFIRVSGSELVQKFIGEG---------SRMVREL------------FVMAREHAPSIIFMDE 244
            ...||:.:    |||.....|         |||::..            .|:...|.|     |:
Mouse   324 VLATFVHM----LVQWMADLGLEVEESTVYSRMIQAAAQQKDTHLTITPTVLGERHLP-----DQ 379

  Fly   245 IDS---IGSARLETGTGDSEVQRTMLELLNQLDGFEATKN---IKVI---MATNRIDVLDQALLR 300
            :.|   |.|:.|..|.....:.|.:::.|:.:..|:..|.   .:|:   .|.:|.:||.|
Mouse   380 LASVTRISSSDLSLGHVTRALCRGIVQNLHSMLPFQQLKEWGVARVVGSGSALSRNEVLKQ---- 440

  Fly   301 PGRIDRKIEFP 311
              .:.|...||
Mouse   441 --EVQRAFPFP 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	66/336 (20%)
Shpk	NP_083307.1	ASKHA_NBD_FGGY_SHK	6..466	CDD:466796	66/336 (20%)