DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6R and Katnal2

DIOPT Version :10

Sequence 1:NP_651811.1 Gene:Rpt6R / 43635 FlyBaseID:FBgn0039788 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001355584.1 Gene:Katnal2 / 71206 MGIID:1924234 Length:539 Species:Mus musculus


Alignment Length:476 Identity:132/476 - (27%)
Similarity:217/476 - (45%) Gaps:116/476 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FHSYYTQKISELQFTV-----------------------NERQKNLLRLQAQRNELNLK------ 49
            :.|||..|..:....|                       |:..:||.::..|::.....      
Mouse    75 YESYYFVKFQKYPKVVKKAPDPVENNLPSRSGGKNKRLTNDSCQNLPKICHQKSRPKTSAVKTGD 139

  Fly    50 VRLLREELQLLQEQ-----------GSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTIN--IKD 101
            .:.::|.|:.::|.           |..|:::.|...:.    |..|....::|....::  ||.
Mouse   140 TKSVKEHLKQVKESVTDTQAESTDFGLNISKIHKDQPEE----KAQPRRGQIIDFRGLLSDAIKG 200

  Fly   102 VT-------------PSSR--------VALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMV 145
            .|             ||.|        :.:.:|...|..:        ||..:....|:..:..:
Mouse   201 ATSEFALNTFECNPDPSERLLKPLSAFIGMNSEMRELAAV--------VSRDIYLHNPNIKWNDI 257

  Fly   146 GGLDKQIQEIKEVIELPVKHPELFDALGITQP-KGVLLYGPPGTGKTLLARAVAHHTEC--TFIR 207
            .|||...|.:||.:..|:::|:||  .||..| ||:||||||||||||||:|||  |||  ||..
Mouse   258 IGLDAAKQLVKEAVVYPIRYPQLF--TGILSPWKGLLLYGPPGTGKTLLAKAVA--TECKTTFFN 318

  Fly   208 VSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQ-RTMLELLN 271
            :|.|.:|.|:.|:..::||.||.:||.||||.||:||::|:.|.|.....|:.|.. |...|||.
Mouse   319 ISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLV 383

  Fly   272 QLDGFEATKNIKVIMATNRID-VLDQALLRPGRIDRKIEFPPPNEEARLDIL--------KIHSR 327
            |:||...::::..::|.:.:. .||.|:||  |::::|....|::|||..::        |.|: 
Mouse   384 QMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSQEARQAMIYHWLPPVSKNHA- 445

  Fly   328 KMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRE------------------RRVHVTQE 374
             :.|...:....:::|..|.||:::|.||.||.|..:|:                  :...||.:
Mouse   446 -LELHTQLEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFSVLENNQSESNNLPGIQLDTVTTQ 509

  Fly   375 DFEMAVSKVMMKDSEKNMSIR 395
            ||...::..  |.|.||::.|
Mouse   510 DFLDVLAHT--KPSAKNLTER 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6RNP_651811.1 PRK03992 21..395 CDD:179699 128/467 (27%)
Katnal2NP_001355584.1 LisH 25..55 CDD:128913
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..121 2/27 (7%)
RecA-like_VPS4-like 257..421 CDD:410917 76/169 (45%)
AAA_lid_3 457..495 CDD:465537 11/37 (30%)
Blue background indicates that the domain is not in the aligned region.

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