Protein Alignment Rpt6R and psmc5

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_001003740.1
• Gene: psmc5 / 445285
• ZFINID: ZDB-GENE-030131-6547
• Length: 406
• Species: Danio rerio
• Alignment Length: 397
• Identity: 348/397 - (87%)
• Similarity: 369/397 - (92%)
• Gaps: 1/397 - (0%)

  Fly     4 DVGIPEGSEGFHSYYTQKISELQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLLQEQGSYIA 68
            |:...:|..|...||..||.|||.||||:.:||.||||||||||.||||||||||||||||||:.
Zfish    10 DIEDSKGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 74

  Fly    69 EVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLML 133
            |||:.|||.|||||||||||:||||||.|:|.||||:.||||||:|||||||||||||||||||:
Zfish    75 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMM 139

  Fly   134 VEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVA 198
            |||||||||||:|||||||:||||||||||||||||:||||.|||||||||||||||||||||||
Zfish   140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

  Fly   199 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGT-GDSEV 262
            |||:|||||||||||||||||||:||||||||||||||||||||||||||||:|||.|: |||||
Zfish   205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEV 269

  Fly   263 QRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSR 327
            ||||||||||||||||||||||||||||||:||.|||||||||||||||||||||||||||||||
Zfish   270 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSR 334

  Fly   328 KMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDSEKNM 392
            |||||||||||||||.|||||||||||||||||||||||||||||||||||||:|||.|||||||
Zfish   335 KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNM 399

  Fly   393 SIRKFWK 399
            ||:|.||
Zfish   400 SIKKLWK 406

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	339/374 (91%)
psmc5	NP_001003740.1	PRK03992	24..400	CDD:179699	338/375 (90%)