Protein Alignment Rpt6R and Rpt2

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_524469.2
• Gene: Rpt2 / 42828
• FlyBaseID: FBgn0015282
• Length: 439
• Species: Drosophila melanogaster
• Alignment Length: 371
• Identity: 171/371 - (46%)
• Similarity: 252/371 - (67%)
• Gaps: 5/371 - (1%)

  Fly    20 QKISELQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLLQEQGSYIAEVVKPMDKNKVLVKVH 84
            ::|.:.....:|..:|..||:.| :|.|.:.|...::|:........:.|::   |.|..:|...
  Fly    65 ERIKDYLMMEDEFIRNQERLKPQ-DEKNEEERSKVDDLRGTPMSVGNLEEII---DDNHAIVSTS 125

  Fly    85 PEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGLD 149
            ...::.|.:...::...:.|...|.|.::.:.:..:|.:..||:|::|.:||.|..||..:||||
  Fly   126 VGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLD 190

  Fly   150 KQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 214
            .|||||||.:|||:.|||.::.:||..||||:|||||||||||||:|||:.|..||:||.||||:
  Fly   191 TQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 255

  Fly   215 QKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGT-GDSEVQRTMLELLNQLDGFEA 278
            ||::|:|.::|||||.:|.||||||:|:||||::|:.|.::.: |:.|:||||||||||||||::
  Fly   256 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320

  Fly   279 TKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEE 343
            ..::|||||||||:.||.||:||||||||||||.|:|:.:..|..||:.:|.|...:||.::...
  Fly   321 RGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMA 385

  Fly   344 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDSE 389
            ....|||::|.:|||||:.||||||:.||.|||:.:...|:.:..|
  Fly   386 KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 431

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	171/370 (46%)
Rpt2	NP_524469.2	PTZ00361	1..439	CDD:185575	171/371 (46%)