Protein Alignment Rpt6R and Rpt3R

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_649938.2
• Gene: Rpt3R / 41190
• FlyBaseID: FBgn0037742
• Length: 405
• Species: Drosophila melanogaster
• Alignment Length: 391
• Identity: 168/391 - (42%)
• Similarity: 243/391 - (62%)
• Gaps: 13/391 - (3%)

  Fly    14 FHSYYTQKIS-----ELQFTVNERQKNLLRLQAQRN-----ELNLKVRLL--REELQLLQEQGSY 66
            ||....:|..     :|.....:.|..|..:|.|.:     :.|||...:  :||::.::.....
  Fly    11 FHEQSLEKYDGLDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAVPLV 75

  Fly    67 IAEVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSL 131
            |.:.::.:|:|..:|.......|.|.|..||:.:.:.|||.|.|..:|..|..::|.:.|..:|:
  Fly    76 IGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISM 140

  Fly   132 MLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARA 196
            :..::.||.:|..:||||.|.|||:|.:|||:.|.:|:..:||..|:||||:||||.|||:||:|
  Fly   141 LSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKA 205

  Fly   197 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTG-DS 260
            |||||..:||||.|||.|||::|||.||||:||.:|::::|||||:||||:|.:.|.:..|| |.
  Fly   206 VAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADR 270

  Fly   261 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIH 325
            ||||.:||||||:|||:.|.||||||||||.|.||.|||||||:|||||.|.|:...:..:....
  Fly   271 EVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTI 335

  Fly   326 SRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDSEK 390
            :.|||:...::|..|.......|.|::..:|.||||:|:||.|..|..:|||......:.||..:
  Fly   336 TSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEKGYKTSVRKDEAQ 400

  Fly   391 N 391
            :
  Fly   401 H 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	166/384 (43%)
Rpt3R	NP_649938.2	PTZ00454	20..405	CDD:240423	165/382 (43%)