Protein Alignment Rpt6R and Afg3l2

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_730248.2
• Gene: Afg3l2 / 39922
• FlyBaseID: FBgn0036702
• Length: 826
• Species: Drosophila melanogaster
• Alignment Length: 427
• Identity: 141/427 - (33%)
• Similarity: 214/427 - (50%)
• Gaps: 83/427 - (19%)

  Fly     4 DVGIPEGS--EGFHSYYTQKISELQFTVNERQKNLLRLQAQRNE--------LNL-KVRLLREEL 57
            ::|..|.|  |..:||.::.:.|....||   |..:|::.|:|.        .|: .|......|
  Fly   182 EMGYKEISWKEFVNSYLSKGVVEKLEVVN---KKWVRVRLQQNSNSGSGVLWFNIGSVDSFERNL 243

  Fly    58 QLLQ-EQGSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKIL 121
            :..| |||:.....|..:.:|:|                                 |:.:|..:|
  Fly   244 EAAQTEQGTESINFVPVIYRNEV---------------------------------EAASLTGLL 275

  Fly   122 PNK--VDPLVSLM-----------------LVEKVPDST------------YEMVGGLDKQIQEI 155
            |..  :..||.:|                 |...|..||            ::.|.|.::...||
  Fly   276 PTLLIIGFLVYMMRKSADMMGGGRGRKGGGLFGGVMQSTAKLTNPNEIGVGFKDVAGCEEAKIEI 340

  Fly   156 KEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGE 220
            .|.:.. :|:|:.:..||...|||.:|.|||||||||||:|.|......||.|||||.::.|:|.
  Fly   341 MEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGV 404

  Fly   221 GSRMVRELFVMAREHAPSIIFMDEIDSIGSAR-LETGTGDSEVQRTMLELLNQLDGFEATKNIKV 284
            |...||::|.|||:|||.|:|:||||::|..| .:|..|.||.:.|:.:||.::|||..|.|:.|
  Fly   405 GPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVV 469

  Fly   285 IMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIH--SRKMNLTRGINLRKIAEEMPGA 347
            :.||||:|:||:||:||||.||:|..|.|:.:.|..|.|:|  :.|.:|.:....||:|...||.
  Fly   470 LAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSLDKNELSRKMAALTPGF 534

  Fly   348 SGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVM 384
            :||::..||.||.:.|.|:.:..:..:.||.|:.:|:
  Fly   535 TGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVI 571

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	135/408 (33%)
Afg3l2	NP_730248.2	HflB	168..765	CDD:440233	141/427 (33%)