Protein Alignment Rpt6R and psmc6

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_989342.1
• Gene: psmc6 / 394968
• XenbaseID: XB-GENE-978099
• Length: 389
• Species: Xenopus tropicalis
• Alignment Length: 374
• Identity: 180/374 - (48%)
• Similarity: 243/374 - (64%)
• Gaps: 7/374 - (1%)

  Fly    18 YTQKISELQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLLQEQGSYIAEVVKPMDKNKVLVK 82
            |.:|:.|.:    |....|..|:.|..||..:......:|:.||..|..:.||:|.:.:.|.:||
 Frog    12 YRKKLLEHK----EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVK 72

  Fly    83 VHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGG 147
            .....:|||...:.::...:.|.:||||...:.|:.:.||.:|||||..|..|...:.:|..:||
 Frog    73 ATNGPRYVVGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGG 137

  Fly   148 LDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 212
            |.:||:|::||||||:.:||||..:||..|||.||||||||||||||||||...:|.|::|..|.
 Frog   138 LSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSS 202

  Fly   213 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGT-GDSEVQRTMLELLNQLDGF 276
            :|.|:|||.:|::||:|..||:|.|.||||||||:||..|...|| .|.|:|||::|||||:|||
 Frog   203 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 267

  Fly   277 EATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA 341
            :....:|:||||||.|.||.|||||||:||||....|||:|||||||||:..:.....|:...|.
 Frog   268 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHAGPITKHGEIDYEAIV 332

  Fly   342 EEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDSEK 390
            :...|.:||:::.|||||||:|:|..|..|.||||..||.||  .||:|
 Frog   333 KLSDGFNGADLRNVCTEAGMFAIRADRDFVVQEDFMKAVRKV--ADSKK 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	179/371 (48%)
psmc6	NP_989342.1	PRK03992	5..379	CDD:179699	179/372 (48%)