Protein Alignment Rpt6R and psmc2

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_957260.1
• Gene: psmc2 / 393941
• ZFINID: ZDB-GENE-040426-1327
• Length: 433
• Species: Danio rerio
• Alignment Length: 379
• Identity: 185/379 - (48%)
• Similarity: 252/379 - (66%)
• Gaps: 10/379 - (2%)

  Fly    16 SYYTQKISELQFTVNERQKNLLRLQA-QRNELNLKVRLLRE---ELQLLQ-EQGSYIAEVVKPMD 75
            |.|:::|.:::..:.:..|.:..|.. :.::..|....|.:   :.|.|| ||...:|...|.::
Zfish    39 STYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIIN 103

  Fly    76 KN----KVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEK 136
            .:    |.::.|....|:|||:...:...|:....||.:....|.:|..||.|:||.|::|.||:
Zfish   104 ADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEE 168

  Fly   137 VPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHT 201
            .||.||..|||..:||::::||:|.|:.|||.|..|||..||||||:|||||||||.|||||:.|
Zfish   169 KPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233

  Fly   202 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGT-GDSEVQRT 265
            :..||||.|||||||::|||:|||||||.|||.....:||.||||:||.||.:.|. ||:|||||
Zfish   234 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRT 298

  Fly   266 MLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN 330
            ||||:||||||:...||||:|||||.|.||.||:||||:||||||..|:.|.|..|.|||:|.|:
Zfish   299 MLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363

  Fly   331 LTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVM 384
            :.|.|....:|...|.::|||::.|||||||:|:|.||...|::||..||:||:
Zfish   364 VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVI 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	183/374 (49%)
psmc2	NP_957260.1	PRK03992	44..430	CDD:179699	183/374 (49%)