Protein Alignment Rpt6R and YME1L

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_001246473.1
• Gene: YME1L / 37636
• FlyBaseID: FBgn0034792
• Length: 740
• Species: Drosophila melanogaster
• Alignment Length: 383
• Identity: 136/383 - (35%)
• Similarity: 196/383 - (51%)
• Gaps: 37/383 - (9%)

  Fly    28 TVNERQKNLLRLQAQR--NELNLKVRLLREELQLLQEQGSYIAEVVKPMDKNKVLVKVHPEG--- 87
            |:..|.||.|....||  .:..|:...||..|...:|.|...||.:|.......|...:.|.
  Fly   183 TMTSRLKNALANSPQRLDGDTPLQAEKLRRLLAKSEEHGFNKAESLKIAFAEGYLAAANSEDSPK 247

  Fly    88 -----KY--------VVDVDKTINIKDVTPSSRVALRNESYTLHKILPN--KVDPLVSLMLVEKV 137
                 ||        |:.|...|.:...|.|:....|:..      |.|  :|||       |::
  Fly   248 SGKTMKYLKTLQTIVVIVVFLGIFLSFFTTSNGSVFRSIQ------LGNQVEVDP-------EEI 299

  Fly   138 PDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTE 202
             :.|:|.|.|.|:..||:|||:|. :|.||.|..||...||||||.|||||||||||||||...:
  Fly   300 -NVTFEDVKGCDEAKQELKEVVEF-LKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAK 362

  Fly   203 CTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQRTML 267
            ..|...:|.|..:..:|:|:|.||:||..|:..||.:||:|||||:|:.|..: .......:|:.
  Fly   363 VPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNS-VLHPYANQTIN 426

  Fly   268 ELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLT 332
            :||:::|||.....:.|:.||||.|.||||||||||.|.::....|:...|.:||.::..|: |.
  Fly   427 QLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKI-LH 490

  Fly   333 RGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDSEK 390
            ..|:|..:|....|.:||:::.:..:|.:.|..:....|:.:..|.|..||:|....|
  Fly   491 DEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPERK 548

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	136/383 (36%)
YME1L	NP_001246473.1	HflB	258..737	CDD:440233	116/308 (38%)