DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6R and Gk5

DIOPT Version :10

Sequence 1:NP_651811.1 Gene:Rpt6R / 43635 FlyBaseID:FBgn0039788 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001417479.1 Gene:Gk5 / 367146 RGDID:1311223 Length:534 Species:Rattus norvegicus


Alignment Length:412 Identity:74/412 - (17%)
Similarity:135/412 - (32%) Gaps:133/412 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 KNKVLVKVH--------------------PEGKYVVDVDK----TIN---IKDVTPSSRVA--LR 111
            :|||::.|.                    ||.|..|:.|.    ||:   :..:|..|..|  ..
  Rat   156 RNKVMLTVSRFTFTTQHVTLRLVWILQNLPEVKKAVEEDNCCFGTIDTWLLYKLTKGSSYATDYS 220

  Fly   112 NESYT---------LHKILPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPE 167
            |.|.|         ..|::...|.  :...::..|.|::|.. |.:|      :|:..:|:....
  Rat   221 NASTTGFFDPYAMRWSKLIATMVS--IPFSILPPVRDTSYNF-GSVD------EEIFGVPIPVVA 276

  Fly   168 L-------------FDALGITQPKGVLLYGPPGTGKT----------LLARAVAHHTECTFIRVS 209
            |             |:...:....|...:....||||          |:...:.|...|      
  Rat   277 LVGDQQSAMFGECCFETGDVKLTMGTGTFLDINTGKTPQHVNGGFYPLIGWKIGHELVC------ 335

  Fly   210 GSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQRTMLE------ 268
                    :.||:         |.:...:|::..::|      |.|...::|.....||      
  Rat   336 --------LAEGN---------AGDTGTAIVWAQKLD------LFTDAAETEKMALSLEDSEGVY 377

  Fly   269 LLNQLDGFEATKNIKVIMA--------TNRIDVLDQALLRP---------GRIDRKIEFPPPNEE 316
            .:....|.:|..|.....|        |::..:: :|:|..         ..:.|:|:.|..|..
  Rat   378 FVPSFSGLQAPLNDPCACASFMGLKHSTSKYHLV-RAILESIAFRNKQLYDMLQREIQIPVTNIR 441

  Fly   317 ARLDILKIHSRKMNLTRGINLRKIAE----EMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 377
            |...:.. ::..|.:|..:...||..    :|.....|.:.|:.  .|.:|.:|....:.|.:. 
  Rat   442 ADGGVCN-NAFVMQMTSDLINEKIDRPAHFDMSCLGAASLAGLA--VGFWADKEELQKLRQSEM- 502

  Fly   378 MAVSKVMMKDSEKNMSIRKFWK 399
              |.|...|..|..:::..:.|
  Rat   503 --VFKPQRKWQEYEVNMENWVK 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6RNP_651811.1 PRK03992 21..395 CDD:179699 73/406 (18%)
Gk5NP_001417479.1 ASKHA_NBD_FGGY_GK5-like 25..525 CDD:466803 74/412 (18%)

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