Protein Alignment Rpt6R and psmc3

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: XP_005169019.1
• Gene: psmc3 / 321947
• ZFINID: ZDB-GENE-030131-666
• Length: 427
• Species: Danio rerio
• Alignment Length: 386
• Identity: 170/386 - (44%)
• Similarity: 241/386 - (62%)
• Gaps: 27/386 - (6%)

  Fly    23 SELQFTVNERQKNLLRLQAQRNEL-----NLKVR-----LLREELQLL-------QEQGSYIAEV 70
            ||::...:|..:....|||.::::     .:||.     |:...::||       :|.|:.|
Zfish    38 SEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANI--- 99

  Fly    71 VKPMDKNK----VLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSL 131
              .:|..:    .::|......|.:.|...::.:.:.|...|.:..:||.:.:.||.:.|..|..
Zfish   100 --DLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKA 162

  Fly   132 MLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARA 196
            |.|::.|...|..:|||||||||:.|.|.||:.|.|.|:.|||..|||||:||||||||||||||
Zfish   163 MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 227

  Fly   197 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLET-GTGDS 260
            .|..|:.||::::|.:|||.|||:|:::||:.|.:|:|.||||||:||:|:||:.|.:: ..||.
Zfish   228 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 292

  Fly   261 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIH 325
            ||||||||||||||||:....:|||.||||:|:||.||||.||:|||||||.||||||..|::||
Zfish   293 EVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH 357

  Fly   326 SRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMK 386
            |||||:...:|..::|......:||:.|.||.||||.|||.....:..||:...:.:|..|
Zfish   358 SRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAK 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	170/386 (44%)
psmc3	XP_005169019.1	PRK03992	27..420	CDD:179699	170/386 (44%)