Protein Alignment Rpt6R and Rpt4

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Alignment Length: 373
• Identity: 180/373 - (48%)
• Similarity: 248/373 - (66%)
• Gaps: 13/373 - (3%)

  Fly    29 VNERQKNLL-------RLQAQRNELNLKVRLL---REELQLLQEQGSYIAEVVKPMDKNKVLVKV 83
            ::|.:|.||       ||:.:|.|:....:|.   ..:|:.||..|..:.||:|.:.::|.:||.
  Fly    17 LSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQLTEDKFIVKA 81

  Fly    84 HPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGL 148
            ....:|||...:.::...:...:||||...:.|:.:.||.:|||||..|..|...|.||..:|||
  Fly    82 TNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGL 146

  Fly   149 DKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 213
            ..||:|::||||||:.:||||..:|||.|||.||||||||||||||||||...:..|::|..|.:
  Fly   147 TDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 211

  Fly   214 VQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGT-GDSEVQRTMLELLNQLDGFE 277
            |.|:|||.:|::||:|..||:|.|.||||||||:||..|...|| .|.|:|||::|||||:|||:
  Fly   212 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 276

  Fly   278 ATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAE 342
            :...:|:||||||.|.||.|||||||:|||||.|.|||:|||:|||||:.|:.....|:...|.:
  Fly   277 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVK 341

  Fly   343 EMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDSEK 390
            .....:||:::.||||||::|:|..|.:|.||||..||.||  .|::|
  Fly   342 LSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKV--SDNKK 387

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	180/373 (48%)
Rpt4	NP_572308.3	PRK03992	13..387	CDD:179699	179/371 (48%)