DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6R and CG10793

DIOPT Version :10

Sequence 1:NP_651811.1 Gene:Rpt6R / 43635 FlyBaseID:FBgn0039788 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster


Alignment Length:244 Identity:83/244 - (34%)
Similarity:137/244 - (56%) Gaps:13/244 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 LVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTL 192
            ||...::::.....:..|.|..:.|:.|||.:..|::.|:|| |.|:...:.:||:||||:||||
  Fly   191 LVKTSILQENIKIKWSDVCGNQRAIELIKEAVLTPIEFPQLF-AHGLKPWRSLLLHGPPGSGKTL 254

  Fly   193 LARAVAHHT--ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLET 255
            ||:|:...|  :.||..::.|.:|.|:.||..:::|.||.||.:.|||:||.|||:|:.|.| :.
  Fly   255 LAKALYSETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKR-DR 318

  Fly   256 GTGDSEVQRTMLELLNQLDGFEATKN-IKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARL 319
            .|.....:|...|||..|||.|.:.| :.|:.:||....:|:|.||  |.::|:....||...|.
  Fly   319 ATDHESSKRFKNELLQLLDGMEHSLNGVFVLASTNLPWDIDEAFLR--RFEKKLLVQLPNAAERS 381

  Fly   320 DILKIHSRKMNLTRGIN---LRKIAEEMPGASGAEVKGVCTEAGMYALR 365
            .::   :|.:..:..:|   |.::.|.....:|.|::..|.|..|:.:|
  Fly   382 CLI---NRLLGSSISLNPRLLEQLVEISDHFTGDEIRLACKEISMHRVR 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6RNP_651811.1 PRK03992 21..395 CDD:179699 83/244 (34%)
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 68/167 (41%)
Blue background indicates that the domain is not in the aligned region.

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