Protein Alignment Rpt6R and yta12

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_596797.1
• Gene: yta12 / 2541079
• PomBaseID: SPBC543.09
• Length: 773
• Species: Schizosaccharomyces pombe
• Alignment Length: 260
• Identity: 105/260 - (40%)
• Similarity: 154/260 - (59%)
• Gaps: 14/260 - (5%)

  Fly   145 VGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVS 209
            |.|:|:..:||.|.::. :|:|:.::.||...|:|.:|.|||||||||||:|.|......|:.||
pombe   298 VAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVS 361

  Fly   210 GSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGT--GDSEVQRTMLELLNQ 272
            |||.::.|:|.|...||:||..||::||.|||:||||:||.||...|.  .:.|.:.|:.:||.:
pombe   362 GSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVE 426

  Fly   273 LDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL 337
            :|||.::::|.|...|||.||||.|||||||.||:|....|:...|..|.|:|.:.:.....|:|
pombe   427 MDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDL 491

  Fly   338 --RKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKV---------MMKDSEKN 391
              :::|....|.:||::..||.|..:.|.|.....|....||.|:.:|         ::...|||
pombe   492 IAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKN 556

  Fly   392  391
            pombe   557  556

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	105/260 (40%)
yta12	NP_596797.1	HflB	140..734	CDD:440233	105/260 (40%)