Protein Alignment Rpt6R and shpk-1

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_001366916.1
• Gene: shpk-1 / 188886
• WormBaseID: WBGene00012017
• Length: 430
• Species: Caenorhabditis elegans
• Alignment Length: 313
• Identity: 58/313 - (18%)
• Similarity: 93/313 - (29%)
• Gaps: 144/313 - (46%)

  Fly   186 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFV-------------------- 230
            ||.|...||          |:..|..|.:..||..|:  :.:||:
 Worm   131 PGFGLVTLA----------FLNYSNPEFLTNFIHCGT--IMDLFISILTQNPDPLISHHNAHSWG 183

  Fly   231 MAREHA----------PSIIFMDEIDSIG-------SARLETGTGDSEVQRTMLELLNQLDGFEA 278
            ...|:|          |..:.:.:|:|..       .|:....:||.:..      :..||.:|.
 Worm   184 YCTENATWQSEILDFLPKTLKLPDINSSSEVSGTWHGAKCHVASGDLQAS------VASLDYYEN 242

  Fly   279 T-------------------KNIKVIMAT------------------------------------ 288
            |                   ||..||.||
 Worm   243 TAYVILGTSAQLCCLIQTSEKNATVIPATVVRLPFSTSKTLVAACAMNGGNALEATLKMNSPEVY 307

  Fly   289 --NRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGIN--------------- 336
              ||:    |.||  .::|:.....|||  .|:|.:.|..|..:.|..|:
 Worm   308 SSNRL----QELL--NQLDKSAPAMPPN--LRIDPIFIPERGSSKTFSISGTSDDPLQLLEATHQ 364

  Fly   337 --LRKIAE--EMPGASGAEVKGVCTEAGMYALRERRVHVTQ----EDFEMAVS 381
              :|.:.|  .:|.....:::.|.......:.|.|| |:.:    .:||:.||
 Worm   365 GIIRNLFELFPIPLLKSLKIRRVALVGSAQSPRFRR-HLEEACGSNNFELLVS 416

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	58/313 (19%)
shpk-1	NP_001366916.1	ASKHA_NBD_FGGY_SHK	5..430	CDD:466796	58/313 (19%)