Protein Alignment Rpt6R and ymel-1

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_001366715.1
• Gene: ymel-1 / 176460
• WormBaseID: WBGene00010842
• Length: 723
• Species: Caenorhabditis elegans
• Alignment Length: 279
• Identity: 108/279 - (38%)
• Similarity: 164/279 - (58%)
• Gaps: 19/279 - (6%)

  Fly   122 PNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPP 186
            |.:|:|       |.| ..|::.|.|:|:...|::|:::. :|.||.:..||...||||||.|||
 Worm   235 PQEVNP-------EDV-QVTFDDVRGMDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPP 290

  Fly   187 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 251
            ||||||||||:|...:..|...:|||..:..:|:|:|.||:||..|:..||.|||:|||||:||.
 Worm   291 GTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSK 355

  Fly   252 RLETGTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEE 316
            |:.... .....:|:.:||:::|||...:.|.||.||||:|.||:|||||||.|.::..|.|:..
 Worm   356 RVSNSI-HPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLA 419

  Fly   317 ARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVS 381
            .|:||...:..|:..:.||:.:.:|:...|.:||:::.:..:|.:.|..:..|.||....:.|..
 Worm   420 GRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARD 484

  Fly   382 KVMM---------KDSEKN 391
            :|:|         .|.|.|
 Worm   485 RVLMGPARTGGRIPDEEAN 503

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	108/279 (39%)
ymel-1	NP_001366715.1	HflB	170..686	CDD:440233	108/279 (39%)