Protein Alignment Rpt6R and rpt-3

DIOPT Version :10

• Sequence 1: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_498429.1
• Gene: rpt-3 / 175925
• WormBaseID: WBGene00004503
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 372
• Identity: 165/372 - (44%)
• Similarity: 234/372 - (62%)
• Gaps: 10/372 - (2%)

  Fly    25 LQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLLQEQGSYIAEV-------VKPMDKNKVLVK 82
            ::.|..|||  |..||...:.:.|:.|.|.:||...||:...|..|       ::.:|:|..:|.
 Worm    38 IKLTTLERQ--LAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVG 100

  Fly    83 VHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGG 147
            ......|.|.|...::.:.:.|...|||...|..|..:||.:.|..:.::..::.||.:|..:||
 Worm   101 STTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGG 165

  Fly   148 LDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 212
            ||.|.||::|.:|||:.|.||:..:||..|:|||:|||||.|||:||:|||.:|..:||||.|||
 Worm   166 LDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSE 230

  Fly   213 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTG-DSEVQRTMLELLNQLDGF 276
            .|||::|||.||||::|.:|:|::|||||:||||:|.:.|.:..|| |.||||.:||||||:|||
 Worm   231 FVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF 295

  Fly   277 EATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA 341
            :.:.|:||||||||.|.||.|||||||:|||||||.|:...:..:......:|||:..::|....
 Worm   296 DQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWV 360

  Fly   342 EEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDS 388
            ......|||::..:|.||||.|:||.|..|..:|.|.|...|:.||:
 Worm   361 ARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDT 407

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	165/372 (44%)
rpt-3	NP_498429.1	PTZ00454	35..414	CDD:240423	165/372 (44%)