DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6R and YME1L1

DIOPT Version :10

Sequence 1:NP_651811.1 Gene:Rpt6R / 43635 FlyBaseID:FBgn0039788 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_647473.1 Gene:YME1L1 / 10730 HGNCID:12843 Length:773 Species:Homo sapiens


Alignment Length:419 Identity:129/419 - (30%)
Similarity:218/419 - (52%) Gaps:54/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 HSYYTQKI-SELQF-----------TVNERQKNLLRLQAQRNEL----NLKVRLLREELQLLQEQ 63
            ||...|.| |:||:           |:..|.:   |||:....|    |:....::.  .||:::
Human   185 HSRALQSICSDLQYWPVFIQSRGFKTLKSRTR---RLQSTSERLAETQNIAPSFVKG--FLLRDR 244

  Fly    64 GSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKI-------- 120
            ||.:..:.|.| |.|.:.:.|.:.......:..:..:.:|..:..:||.....|..:        
Human   245 GSDVESLDKLM-KTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILFVLLLFGIYGL 308

  Fly   121 ---------------LPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFD 170
                           |.:.|||:       ::.:.|:|.|.|:::..||::||:|. :|:|:.|.
Human   309 LKNPFLSVRFRTTTGLDSAVDPV-------QMKNVTFEHVKGVEEAKQELQEVVEF-LKNPQKFT 365

  Fly   171 ALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREH 235
            .||...|||:||.|||||||||||||||...:..|...||||..:.|:|.|:..:|.||..|:.:
Human   366 ILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKAN 430

  Fly   236 APSIIFMDEIDSIGSARLETGTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLR 300
            ||.:||:||:||:|..|:|:...... ::|:.:||.::|||:..:.:.:|.|||..:.||.||:|
Human   431 APCVIFIDELDSVGGKRIESPMHPYS-RQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIR 494

  Fly   301 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALR 365
            |||.|.::..|.|:.:.|.:|||.:..|:...:.::...||....|.||||::.:..:|.:.|..
Human   495 PGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAV 559

  Fly   366 ERRVHVTQEDFEMAVSKVMMKDSEKNMSI 394
            :.:..||.::.|.:..|::|....:::.|
Human   560 DGKEMVTMKELEFSKDKILMGPERRSVEI 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6RNP_651811.1 PRK03992 21..395 CDD:179699 126/413 (31%)
YME1L1NP_647473.1 HflB <332..767 CDD:440233 98/259 (38%)

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