DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9702 and slc26a4.3

DIOPT Version :9

Sequence 1:NP_001263113.1 Gene:CG9702 / 43634 FlyBaseID:FBgn0039787 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001107135.1 Gene:slc26a4.3 / 779605 XenbaseID:XB-GENE-950380 Length:778 Species:Xenopus tropicalis


Alignment Length:661 Identity:155/661 - (23%)
Similarity:267/661 - (40%) Gaps:145/661 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SCCSRYARNIFRKKTLLKRLPFLTWLPHYN-RQDCIGDLIAGFTVGLTVIPQGLAYSGVVGLPPE 122
            ||.|:.|..|.:     |..|.|.|||.|. ::..:.|||:|.:.||....||||::.:..:|..
 Frog    51 SCTSKKAYFIVK-----KFFPVLDWLPKYRWKEWFVNDLISGVSTGLVGTLQGLAFALLAAVPVG 110

  Fly   123 YGLYGSFMGCFVYVLLGTCKDSTIGSTAVASLMTFQFAQGSWQRSV------------------- 168
            ||||.||.....|..|||.|..::|...|.|||.     ||...|:                   
 Frog   111 YGLYSSFFPILTYFFLGTSKHISVGPFPVVSLMV-----GSVVLSIAPDEKFAILGNATGLNKTI 170

  Fly   169 ---------------LLTFLTGIIEILMAIFKLGCLVEFVSGPVSAGFTSAVALIVSTSQMRSML 218
                           .|:||.|||::.:.||::|.:|.:::.|:..|||:|.|..|..||.:.:|
 Frog   171 IDTVARDAARIAVSGTLSFLIGIIQLALGIFQIGFIVRYLADPLVGGFTTAAAFQVFVSQFKLVL 235

  Fly   219 GVKSDGGSFLATWISMFRDI-ENVR---VADTCLGFGCVILLLAMRSLGKFTIGPKDESRRNGFQ 279
            .|.:...:.:.:.|...||| .|:|   :||...|....::.:.::.:            .:.::
 Frog   236 NVPTQNYNGVLSIIYTIRDIFMNIRLTNIADLIAGLLTFVVCVVVKEI------------NDRYK 288

  Fly   280 RVVNTVIKFLSTSRNASVVILFTAVTMYLDANGTNPFRLTGNIPKGMPTPSLPPFSIEPQPGNET 344
            |:....|..     ...|.|:.|.::..::.:......:...||.|...|..|..|:..|.|:..
 Frog   289 RIFRVPIPI-----EVIVTIVATGISYGVNLHAKYNAGIVATIPSGFIPPMTPDVSLFSQIGSSA 348

  Fly   345 AGIPAVEGQTFPEMVQSLGYGLVIVPLMALLETMSVCKAFA--KGKQIDITQEMIACGVGNIATS 407
            ..|                 |:|     |....:||.|.:|  ...::|..||.||.|:.|:...
 Frog   349 FSI-----------------GIV-----AYAVAVSVGKVYATKHNYEVDGNQEFIAFGISNLFGG 391

  Fly   408 LFSGYRCNGGLARSAVNNASGCRTNMSNLYIGVIVVLALNFLTEYIAFIPKAVLAAIIISAVIFQ 472
            .||.:.....|:|:||..::|.||.::.:....||::|:..|...:..:.|:|||||:| |.:..
 Frog   392 AFSCFCATTALSRTAVQESTGGRTQIAGIISAGIVLIAIVALGRLLEPLQKSVLAAIVI-ANLKG 455

  Fly   473 VQYQV--VTPMWRSKRSDLVPGILAFVTCLVLPLEIGIMVAIGVNLLFILYYAARPKV------- 528
            :.:||  :..:|:..:.|....:...:..:.|.|:.|::..:...|..||.....|..       
 Frog   456 MFWQVFDIPRLWKQNKWDSAIWVFTCIASIFLGLDSGLLAGLLFGLATILLRVQFPSCGALGNVP 520

  Fly   529 ---------TLEQLETQQGIRFVKITPDRCLIFPSVEFVRNMVLKLGSKSTLPVVIDCTYIYAAD 584
                     ..:.|...:|::.::.|..  :.:.:::..:|.:..:       |..|...:|...
 Frog   521 GTDIYKNVKEYKNLIEPEGVKIIRHTSG--MFYGNIDGFKNAIKSI-------VGFDPVKVYNKR 576

  Fly   585 FTAAKVISSIVDDFRRRQQKIIFFNLKPSVVSVFEGLNTRLVLCYNTHALNQELRPDEPDLSRSV 649
            ..|.:.|..::...:.|       :.|..|:|             ||...|:...|||       
 Frog   577 TKALRKIQKLIKKGQLR-------STKNGVIS-------------NTGTDNEGFEPDE------- 614

  Fly   650 DSLDHAESGNG 660
            |..|..:..||
 Frog   615 DVEDPEQENNG 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9702NP_001263113.1 SUL1 72..614 CDD:223732 138/600 (23%)
STAS_SulP_like_sulfate_transporter 531..619 CDD:132913 13/87 (15%)
slc26a4.3NP_001107135.1 sulP 66..723 CDD:273284 149/641 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X49
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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