DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and NOD2

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_071445.1 Gene:NOD2 / 64127 HGNCID:5331 Length:1040 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268
LRR_RI <285..421 CDD:238064
NOD2NP_071445.1 DD 34..119 CDD:301326
ATG16L1-binding motif 63..77
CARD_NOD2_2_CARD15 134..214 CDD:260056
Required for CARD9 binding. /evidence=ECO:0000269|PubMed:24960071 241..274
NACHT 293..463 CDD:283404
leucine-rich repeat 764..791 CDD:275381
LRR_RI 767..1032 CDD:238064
LRR 1 791..812
LRR <795..1040 CDD:227223
leucine-rich repeat 795..816 CDD:275380
LRR 2 816..839
leucine-rich repeat 820..844 CDD:275380
LRR 3 844..865
leucine-rich repeat 845..868 CDD:275380
leucine-rich repeat 869..900 CDD:275380
LRR 4 872..884
LRR 5 900..920
leucine-rich repeat 901..928 CDD:275380
LRR 6 928..949
leucine-rich repeat 929..952 CDD:275380
LRR 7 956..976
leucine-rich repeat 957..984 CDD:275380
LRR 8 984..1005
leucine-rich repeat 985..1006 CDD:275380
LRR 9 1012..1032
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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