DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and Tmod2

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_113801.1 Gene:Tmod2 / 58814 RGDID:61948 Length:351 Species:Rattus norvegicus


Alignment Length:347 Identity:123/347 - (35%)
Similarity:195/347 - (56%) Gaps:17/347 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 YGKDLSEYDDVDVESLLAQLSPEEITILAK---EVDPDDNFLPPDQRNSYECTKEATGPLNRKQL 152
            :.|.|.:|.::|.:.||.:||.||:..|..   ::||:...||...|...:..|.||||.:|:.|
  Rat     5 FQKGLEKYKNIDEDELLGKLSEEELKQLENVLDDLDPESATLPAGFRQKDQTQKAATGPFDREHL 69

  Fly   153 IEHINKQAIETPDQPEFEPFVQGKVRGKKWVPPPRDARDIEAEEQIAIDMGEEYEHALNDATQEE 217
            :.::.|:|:|..|:.:|.||. |:.:|:.::|..:.. :...||::.:|  .|.|.||..|:..|
  Rat    70 LMYLEKEALEQKDREDFVPFT-GEKKGRVFIPKEKPV-ETRKEEKVTLD--PELEEALASASDTE 130

  Fly   218 IIDLAAILGFHSMMNQDQYHASLLNKGQPVGLGWDG----ITKSTQQKLFPMDPPNNTDVEESIK 278
            :.||||:||.|:::|..::.....|     |.|..|    :.|..:.|....:|||.|:||.|::
  Rat   131 LYDLAAVLGVHNLLNNPKFDEETTN-----GQGRKGPVRNVVKGEKAKPVFEEPPNPTNVEASLQ 190

  Fly   279 RVKDDDSKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIEKSKT 343
            ::|.:|..|.::||||||||....|::...||..|.|:...||......|..||..|..::.:||
  Rat   191 QMKANDPSLQEVNLNNIKNIPIPTLKEFAKALETNTHVRKFSLAATRSNDPVALAFAEMLKVNKT 255

  Fly   344 LRVLNVETNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKNSSLLRLGL 408
            |:.||||:|||:...|:.||:||.:..|:.|.:..|||.. ||..:||||..::|:||.:|:.|.
  Rat   256 LKSLNVESNFITGAGILALVEALRENDTLTEIKIDNQRQQ-LGTAVEMEIAQMLEENSRILKFGY 319

  Fly   409 HLEFNDARHRVAAHLQRNIDRI 430
            .......|.||||.:.:|.|.:
  Rat   320 QFTKQGPRTRVAAAITKNNDLV 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 49/144 (34%)
LRR_RI <285..421 CDD:238064 54/135 (40%)
Tmod2NP_113801.1 Tropomodulin 5..146 CDD:397382 49/144 (34%)
LRR_RI <197..>291 CDD:423007 37/93 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351735
Domainoid 1 1.000 127 1.000 Domainoid score I5235
eggNOG 1 0.900 - - E1_KOG3735
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I3491
OMA 1 1.010 - - QHG47963
OrthoDB 1 1.010 - - D1025132at2759
OrthoFinder 1 1.000 - - FOG0001180
OrthoInspector 1 1.000 - - otm44624
orthoMCL 1 0.900 - - OOG6_105629
Panther 1 1.100 - - LDO PTHR10901
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X804
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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