DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and Tmod3

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_058659.1 Gene:Tmod3 / 50875 MGIID:1355315 Length:352 Species:Mus musculus


Alignment Length:347 Identity:119/347 - (34%)
Similarity:204/347 - (58%) Gaps:16/347 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 YGKDLSEYDDVDVESLLAQLSPEEI----TILAKEVDPDDNFLPPDQRNSYECTKEATGPLNRKQ 151
            :.|||.:|.|:|.:.||.:||..|:    |:| .::||::..||...|...:.:|.||||.:|::
Mouse     5 FRKDLGDYKDLDEDELLGKLSESELKQLETVL-DDLDPENALLPAGFRQKNQTSKSATGPFDRER 68

  Fly   152 LIEHINKQAIETPDQPEFEPFVQGKVRGKKWVPPPRDARDIEAEEQIAIDMGEEYEHALNDATQE 216
            |:.::.|||:|..|:.::.|:. |:.:||.::|..:.|:.: .||.|::|  .|.|.||..|:..
Mouse    69 LLSYLEKQALEHKDRDDYVPYT-GEKKGKIFIPKQKPAQTL-TEETISLD--PELEEALTSASDT 129

  Fly   217 EIIDLAAILGFHSMMNQDQYHASLLNKGQPVGL-GWDGITKSTQQKLFPM--DPPNNTDVEESIK 278
            |:.|||||||.|::: .|.....:|.....|.. .:..:.|.  :|:.|:  :|||.|:||||:|
Mouse   130 ELCDLAAILGMHNLI-ADTPFCDVLGSSNGVNQERFPNVVKG--EKILPVFDEPPNPTNVEESLK 191

  Fly   279 RVKDDDSKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIEKSKT 343
            |::::|::|:::||||||||....|:.....|..|.|::..||......|..|:..|..::.:||
Mouse   192 RIRENDARLVEVNLNNIKNIPIPTLKDFAKTLEANTHVKHFSLAATRSNDPVAVAFADMLKVNKT 256

  Fly   344 LRVLNVETNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKNSSLLRLGL 408
            |:.||:|:|||:...::.|:.||....|:.|.:..|||.. ||..:|:|:..::|:|:::|:.|.
Mouse   257 LKSLNMESNFITGAGVLALIDALRDNETLMELKIDNQRQQ-LGTSVELEMAKMLEENTNILKFGY 320

  Fly   409 HLEFNDARHRVAAHLQRNIDRI 430
            .......|.|.|..:.:|.|.:
Mouse   321 QFTQQGPRTRAANAITKNNDLV 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 54/145 (37%)
LRR_RI <285..421 CDD:238064 45/135 (33%)
Tmod3NP_058659.1 Tropomodulin 5..144 CDD:281268 54/143 (38%)
LRR_RI <199..311 CDD:238064 39/112 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848156
Domainoid 1 1.000 131 1.000 Domainoid score I5112
eggNOG 1 0.900 - - E1_KOG3735
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 223 1.000 Inparanoid score I3508
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47963
OrthoDB 1 1.010 - - D1025132at2759
OrthoFinder 1 1.000 - - FOG0001180
OrthoInspector 1 1.000 - - otm42558
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10901
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2851
SonicParanoid 1 1.000 - - X804
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.940

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