DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and lmod2a

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_005163172.1 Gene:lmod2a / 447877 ZFINID:ZDB-GENE-040912-41 Length:461 Species:Danio rerio


Alignment Length:365 Identity:102/365 - (27%)
Similarity:177/365 - (48%) Gaps:59/365 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 YGKDLSEYDDVDVESLLAQLSPEEITILAK---EVDPDDNFLPPDQRNSYECTKEATGPLNRKQL 152
            |.|.|.::::::.:.|||.|:.||:..|.|   |::||:| :|...:...:..|::||...|..|
Zfish     6 YRKGLGKHEEIEEDELLASLTSEELQELEKIMAEMEPDEN-IPIGLQQEDQTAKKSTGTFCRGSL 69

  Fly   153 IEHINKQAIETPDQPEFEPFVQGKVRGKKWVPPPRDARD----IEAEEQIAIDMGEEYEHALNDA 213
            :::             :|...|..:         :|:.|    .:.||:.|.:..|:.:....|.
Zfish    70 LKY-------------WEDETQRLL---------KDSMDECQTDKCEEECASEEPEDNKEKGGDR 112

  Fly   214 TQE------EIIDLAAILGFHSMMNQDQYHASLLNKGQPVGLGWDGITKSTQQKLFPMDPPNNTD 272
            .::      ..::|:.:....:....|..|       .||.|  ||            ...|.||
Zfish   113 VKQARSNKWNSVELSRLDSESARKYNDAPH-------YPVTL--DG------------SSCNPTD 156

  Fly   273 VEESIKRVKDDDSKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAA 337
            ::::::.|..:.:.|.::||||::|:|...|.....||..|.|:||.:|.|....|:.||.||..
Zfish   157 IDKTLEHVLSNATSLTEVNLNNVENLSQGVLVGFADALTSNTHVEVFNLANTHADDQVALALAKM 221

  Fly   338 IEKSKTLRVLNVETNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKNSS 402
            ::.:.::..||||:||||...|:.|:::|...:|:.|.|..|||. :.|.::|||:..|::.|:|
Zfish   222 LKANSSITRLNVESNFISGKGILALIKSLQYNNTLTELRFHNQRH-ICGGQVEMEMVKLLKDNTS 285

  Fly   403 LLRLGLHLEFNDARHRVAAHLQRNIDRIFRVQKLKPNLPK 442
            ||:||.|.|....|......|.||.|| .|.::|:....|
Zfish   286 LLKLGYHFELPGPRMSATGILTRNQDR-HRQKRLQERREK 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 31/154 (20%)
LRR_RI <285..421 CDD:238064 52/135 (39%)
lmod2aXP_005163172.1 Tropomodulin 6..>76 CDD:281268 22/83 (27%)
LRR_RI <191..>290 CDD:238064 39/99 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3735
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1025132at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10901
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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