DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tmod and LRRC74B

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001277935.1 Gene:LRRC74B / 400891 HGNCID:34301 Length:392 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268
LRR_RI <285..421 CDD:238064
LRRC74BNP_001277935.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..46
LRR_RI 57..357 CDD:238064
LRR 1 106..129
leucine-rich repeat 109..136 CDD:275380
LRR 2 134..157
leucine-rich repeat 137..164 CDD:275380
LRR 3 162..185
leucine-rich repeat 165..183 CDD:275380
LRR 4 192..213
leucine-rich repeat 193..220 CDD:275380
LRR 5 220..241
leucine-rich repeat 221..245 CDD:275380
LRR 6 248..269
leucine-rich repeat 249..276 CDD:275380
LRR 7 276..297
leucine-rich repeat 277..304 CDD:275380
LRR 8 304..325
leucine-rich repeat 305..334 CDD:275380
LRR 9 334..356
leucine-rich repeat 335..352 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.