DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and Ppp1r37

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001100952.1 Gene:Ppp1r37 / 308398 RGDID:1595870 Length:710 Species:Rattus norvegicus


Alignment Length:610 Identity:127/610 - (20%)
Similarity:206/610 - (33%) Gaps:178/610 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GSAEETKPEPDAQSKTS---VVTEHTEEVIPGETE--------KMVTETIDEDGDVVEETTEVTR 63
            ||:....|..|.:.|.:   |.....|:::.|..|        :.||         |:|.....|
  Rat    30 GSSSGASPPTDGRLKAAAKRVTFPSDEDIVSGAVEPKDPWRHAQNVT---------VDEVISAYR 85

  Fly    64 KTVKRTMKITETSATTKTTTLTTPAKLYGKDLSEYDDVD--------------------VESLLA 108
            :            |..|......|..|  :.|.|:.|::                    :|.:..
  Rat    86 Q------------ACQKLNCRQIPKLL--RQLQEFTDLEQRINCLDLKGEKLDYKTCEALEEVFK 136

  Fly   109 QLSPEEITILAKEVDPDDNFLPPDQRNSYECTKEATGPLNRK------QLIEHINKQ-------- 159
            :|..:.:.:....:|.|......|....||.........|:.      |...|:.::        
  Rat   137 RLQFKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAHMMRKTSCLQYLD 201

  Fly   160 AIETPDQPEFEPFVQGKVRGKKWVPPPRDARDIEAEEQIAIDMGEEYEHALNDATQEEIIDLAAI 224
            |..||......|||               ||.:.....:|:      .|..|.:.....:.|.|.
  Rat   202 ARNTPLLDHSAPFV---------------ARALRIRSSLAV------LHLENASLSGRPLMLLAT 245

  Fly   225 LGFHSMMNQDQYHASLLNKGQPVGLGWDGITKSTQQ--------KLFPMDPPNNTDVEESI---- 277
            ....:|..|:.|.|.  ||       .:|:..|.|.        .|..:|..||..::..:    
  Rat   246 ALKMNMNLQELYLAD--NK-------LNGLQDSAQLGNLLKFNCSLQILDLRNNHVLDSGLAYIC 301

  Fly   278 KRVKDDDSKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIEKSK 342
            :.:|:....|:.|.|.| ..::...:..|..|||..:.||.|:|.:..:.::             
  Rat   302 EGLKEQRKGLVTLVLWN-NQLTHTGMAFLGMALPHTQSLETLNLGHNPIGNE------------- 352

  Fly   343 TLRVLNVETNFISPPVIVK--LVQALLKCH---TIEEFRASNQRSAVLG---NKIE----MEITD 395
              .|.|::...||...:::  |....|.|.   .:.||.|.:.|...|.   |:|:    |.::.
  Rat   353 --GVRNLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSL 415

  Fly   396 LVEKNSSLLRLGLHLE--------FNDARHRVAAHLQRNIDRIF-------RVQKLKP--NLPKL 443
            .::.|.|||||.|..|        |.:.:..:.|.:|....|.|       ..|:|:|  ::|::
  Rat   416 ALKVNHSLLRLDLDREPKKEPVKSFIETQKALLAEIQNGCKRNFVLVREREEKQQLQPSASMPEI 480

  Fly   444 IL--PGNMEIERDLVAYN-RSATPSPSPSPQPPVD---------YEVEEDPDNMVIRGGGD---- 492
            .:  |..:|...||.|.. ::.||.|.|.|....|         .|.|:..|.....||.|    
  Rat   481 TITAPQPLEESGDLPAMGAQNGTPGPGPGPDSDSDSDSDREEQEEEEEDQSDQQRDEGGTDQSSS 545

  Fly   493 ----AFDPDVD---PDNMVVPGSRS 510
                |..|..|   |.:...|||.|
  Rat   546 APCPALLPSTDSLGPGDKSPPGSPS 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 27/175 (15%)
LRR_RI <285..421 CDD:238064 36/155 (23%)
Ppp1r37NP_001100952.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46 5/15 (33%)
LRR_RI 115..433 CDD:238064 72/363 (20%)
leucine-rich repeat 168..196 CDD:275380 3/27 (11%)
leucine-rich repeat 197..224 CDD:275380 8/41 (20%)
LRR 1 224..244 4/25 (16%)
leucine-rich repeat 225..252 CDD:275380 5/32 (16%)
LRR <248..>453 CDD:227223 51/229 (22%)
LRR 2 252..273 8/29 (28%)
leucine-rich repeat 253..281 CDD:275380 8/36 (22%)
LRR 3 281..301 4/19 (21%)
leucine-rich repeat 282..306 CDD:275380 4/23 (17%)
LRR 4 310..330 4/20 (20%)
leucine-rich repeat 311..338 CDD:275380 8/27 (30%)
LRR 5 338..358 6/34 (18%)
leucine-rich repeat 339..367 CDD:275380 8/42 (19%)
leucine-rich repeat 368..394 CDD:275380 6/25 (24%)
leucine-rich repeat 395..414 CDD:275380 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 487..677 24/84 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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