DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and tmod4

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_571271.1 Gene:tmod4 / 30441 ZFINID:ZDB-GENE-991019-9 Length:343 Species:Danio rerio


Alignment Length:346 Identity:127/346 - (36%)
Similarity:212/346 - (61%) Gaps:10/346 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SEYDDVDVESLLAQLSPEE---ITILAKEVDPDDNFLPPDQRNSYECTKEATGPLNRKQLIEHIN 157
            |:..|:|.:::|..||.||   :.|..:|:||::..||...|...:..|..|||.:|..|::::.
Zfish     4 SDPRDIDEDAILRGLSAEELEQLDIELQELDPENTTLPAGFRQRDQTKKSPTGPFDRFALMDYLE 68

  Fly   158 KQAIETPDQPEFEPFVQGKVRGKKWVPPPRDARDIEAEEQIAIDMGEEYEHALNDATQEEIIDLA 222
            |||||..|:.:..||. |:.|||.:||.|...: |.|:|||.::  .|.|.||.:||..|:.|:|
Zfish    69 KQAIEHKDRDDLVPFT-GEKRGKAFVPKPGSGQ-IPADEQITLE--PELEEALRNATDAEMCDIA 129

  Fly   223 AILGFHSMMNQDQYHASLLNKGQPVGL-GWDGITKSTQQKLFPMDPPNNTDVEESIKRVKDDDSK 286
            ||||.:::|:..||:.:|...|:.... |.:.:.|....|::|.:|||:|:|||:::.::.:|::
Zfish   130 AILGMYTLMSNKQYYDALNTTGKIANTEGINSVVKPDVYKIYPEEPPNDTNVEETLRYIQKNDNR 194

  Fly   287 LIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIEKSKTLRVLNVET 351
            |.::|||||.:|....|:::|.|:.:|.|:..||:......|..|..:|..::.:|.|:.||:|:
Zfish   195 LQEVNLNNIPDIPIPTLKEIFEAMKRNTHVLCLSIAGTRSNDPVAYAIAEMLQANKNLQSLNIES 259

  Fly   352 NFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKNSSLLRLGLHLEFNDAR 416
            |||:...::.:|:||.|..|:.|.:..|||.. ||:.:||||..::|||||::::|.|......|
Zfish   260 NFITAQGMMAIVKALRKNSTLIEIKIDNQRQK-LGDSVEMEIASMLEKNSSIIKIGYHFTQQGPR 323

  Fly   417 HRVAAHLQRNIDRIFRVQKLK 437
            .|.|..:.||.| |.|.|:::
Zfish   324 ARAAMAITRNND-ILRQQRVR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 55/139 (40%)
LRR_RI <285..421 CDD:238064 49/135 (36%)
tmod4NP_571271.1 Tropomodulin 4..140 CDD:281268 55/139 (40%)
LRR_RI <235..>314 CDD:238064 31/79 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593554
Domainoid 1 1.000 134 1.000 Domainoid score I4956
eggNOG 1 0.900 - - E1_KOG3735
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I3510
OMA 1 1.010 - - QHG47963
OrthoDB 1 1.010 - - D1025132at2759
OrthoFinder 1 1.000 - - FOG0001180
OrthoInspector 1 1.000 - - otm25480
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10901
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2851
SonicParanoid 1 1.000 - - X804
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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