DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and Tmod4

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001099919.1 Gene:Tmod4 / 295261 RGDID:1308940 Length:345 Species:Rattus norvegicus


Alignment Length:349 Identity:119/349 - (34%)
Similarity:204/349 - (58%) Gaps:13/349 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 YGKDLSEYDDVDVESLLAQLSPEEITIL---AKEVDPDDNFLPPDQRNSYECTKEATGPLNRKQL 152
            |.|:|.:|.|:|.:.:|..|||||:..|   .:|:||::..||...|...:..|..||||:|..|
  Rat     4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPTGPLDRDAL 68

  Fly   153 IEHINKQAIETPDQPEFEPFVQGKVRGKKWVPPPRDARDIEAEEQIAIDMGEEYEHALNDATQEE 217
            ::::.:||:|..::.:..||. |:.:||.::.|   .|:|.|:|||.::  .|.|.||:.||..|
  Rat    69 LQYLEQQALEVKERDDLVPFT-GEKKGKPFIQP---KREIPAQEQITLE--PELEEALSHATDAE 127

  Fly   218 IIDLAAILGFHSMMNQDQYHASLLNKGQPVGL-GWDGITKSTQQKLFPMDPPNNTDVEESIKRVK 281
            :.|:|||||.:::|:..||:.::.: |:.... |...:.:..:.|..|.:|||.|::||.:|||:
  Rat   128 MCDIAAILGMYTLMSNKQYYDAICS-GEICNTEGISSVVQPDKYKPVPDEPPNPTNIEEMLKRVR 191

  Fly   282 DDDSKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIEKSKTLRV 346
            .:|.:|.::|||||::|....|..|..|:..|.::...||......|..|..:|..:.::::|..
  Rat   192 SNDKELEEVNLNNIQDIPIPVLSDLCEAMKTNTYVRSFSLVATKSGDPIANAVADMLRENRSLLS 256

  Fly   347 LNVETNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKNSSLLRLGLHLE 411
            ||:|:||||...::.:::|:.:..|:.|.|..|||... |:.:|||:..::|:..|::|.|.|..
  Rat   257 LNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWP-GDAVEMEMATVLEQCPSIVRFGYHFT 320

  Fly   412 FNDARHRVAAHLQRNIDRIFRVQK 435
            ....|.|.|..:.|| :.:.|.||
  Rat   321 QQGPRARAANAMTRN-NELRRQQK 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 55/144 (38%)
LRR_RI <285..421 CDD:238064 42/135 (31%)
Tmod4NP_001099919.1 Tropomodulin 4..143 CDD:397382 55/144 (38%)
LRR_RI <184..>286 CDD:423007 33/101 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351737
Domainoid 1 1.000 127 1.000 Domainoid score I5235
eggNOG 1 0.900 - - E1_KOG3735
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I3491
OMA 1 1.010 - - QHG47963
OrthoDB 1 1.010 - - D1025132at2759
OrthoFinder 1 1.000 - - FOG0001180
OrthoInspector 1 1.000 - - otm44624
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10901
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X804
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

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