DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and Tmod1

DIOPT Version :10

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_068683.1 Gene:Tmod1 / 21916 MGIID:98775 Length:359 Species:Mus musculus


Alignment Length:366 Identity:136/366 - (37%)
Similarity:214/366 - (58%) Gaps:28/366 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 YGKDLSEYDDVDVESLLAQLSPEEITILAK---EVDPDDNFLPPDQRNSYECTKEATGPLNRKQL 152
            |.::|.:|.|:|.:.:|..|:.||:..|..   |:|||:..||...|...:.||..|||..|::|
Mouse     3 YRRELEKYRDLDEDEILGALTEEELRTLENELDELDPDNALLPAGLRQKDQTTKAPTGPFKREEL 67

  Fly   153 IEHINKQAIETPDQPEFEPFVQGKVRGKKWVP--PPRDARDIEAEEQIAIDMGEEYEHALNDATQ 215
            ::|:.|||.|..|:.:..|:. |:.|||.|||  .|.|    ...|.:.::  .|.|.||.:|:.
Mouse    68 LDHLEKQAKEFKDREDLVPYT-GEKRGKVWVPKQKPMD----PVLESVTLE--PELEEALANASD 125

  Fly   216 EEIIDLAAILGFHSMMNQDQYH-----ASLLNKGQPVGLGWDGITKSTQQKLFPMDPPNNTDVEE 275
            .|:.|:|||||.|::|:..||:     :|::||.     |.:.:.|.||.|..|.:.||:|||||
Mouse   126 AELCDIAAILGMHTLMSNQQYYQALGSSSIVNKE-----GLNSVIKPTQYKPVPDEEPNSTDVEE 185

  Fly   276 SIKRVKDDDSKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIEK 340
            :::|:|::|.:|.::|||||:||....|:....||.:|.:::..|:......|..|..||..::.
Mouse   186 TLERIKNNDPELEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPVAFALAEMLKV 250

  Fly   341 SKTLRVLNVETNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKNSSLLR 405
            :|.|:.||||:||||...|::||:||....::.|.:..|| |..||||:||||.:::|||::||:
Mouse   251 NKVLKTLNVESNFISGAGILRLVEALPHNTSLVELKIDNQ-SQPLGNKVEMEIVNMLEKNTTLLK 314

  Fly   406 LGLHLEFNDARHRVAAHLQRNIDRIFRVQKLK----PNLPK 442
            .|.|......|.|.:..:..|.| :.|.::|.    |.:||
Mouse   315 FGYHFTQQGPRLRASNAMMSNND-LVRKRRLADLTGPIIPK 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:460862 55/146 (38%)
PPP1R42 <285..421 CDD:455733 53/135 (39%)
Tmod1NP_068683.1 Tropomodulin 3..143 CDD:460862 55/146 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..61 10/24 (42%)
Tropomyosin-binding. /evidence=ECO:0000255 39..138 41/105 (39%)
RNA1 <183..314 CDD:444072 54/131 (41%)

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