DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and lrrc45

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_012827024.2 Gene:lrrc45 / 100379987 XenbaseID:XB-GENE-5885628 Length:766 Species:Xenopus tropicalis


Alignment Length:485 Identity:96/485 - (19%)
Similarity:183/485 - (37%) Gaps:149/485 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SKTSVVTEHTEEVIPGETEKMVT--ETIDEDGDVVEETTEVTRKTVKRTMKITET--SATTKTTT 83
            ::..::|:..:.:...:..:.:.  ||||:..   ||...:.|..|.:..|:..|  ..|:...:
 Frog   335 NQQQILTKEVQNLKQDKNRQFINMMETIDKQR---EEMNSINRNAVLQAGKLRGTLEERTSVVNS 396

  Fly    84 LTTPAKLYGKD--LSEYDDVDVESLLAQLSPEEITILAK---------------EVDPDDNFLPP 131
            ||...:|...|  ||...:.|:..||.|:..::.:::.|               |.....:....
 Frog   397 LTAKLQLMEADLALSHQKEQDLGDLLRQVKQQDSSMMEKHAKELMKAKEEFREHEAKRRRDLAAA 461

  Fly   132 DQRNSYECTKEATGPLNRK-----QLIEHINKQAIETPDQPEF------EPFVQGKVRGKKWVPP 185
            :::|.:..:|  ...|.||     .|:..:.::...|..:.:.      |.|...|.|.:::   
 Frog   462 NEKNLHYRSK--IDELERKCQTQQDLVFELKQELTNTTAELKLRAVQAEERFEAEKKRFRQF--- 521

  Fly   186 PRD-------------ARDIEAEEQI---------AIDMGEEYEHA------LNDATQEEIIDLA 222
             ||             |:.:|..|::         |..:|.|.|.:      .|..||.| .:|.
 Frog   522 -RDNSTTLHQKEVDHMAKHLEDAERVTQERVQRLEATKLGLEEELSRLKIMLANQHTQAE-EELQ 584

  Fly   223 AILGFHSMMNQDQYHASLLNKGQPVGLGWDGITKSTQQKLFPMDPPNNTDVEES--IKRVKDDDS 285
            .:..|..:  ::|.|:::|:         |.:...||.:    |...|..::::  |..::..::
 Frog   585 KVRSFVQL--EEQQHSAVLH---------DKLRTLTQSR----DQAQNQVLQQNQMIGELQTKNN 634

  Fly   286 KL---IDLNLNNIKNISDE---KLEQLFAAL--------PQNEHLEVLSLTNVGLTDKTALLLAA 336
            :|   |::....|..|..|   |.|:..:||        .|..|||....|..||.:|     .:
 Frog   635 QLSLEIEVLKRRIDGIQQELATKEEEKLSALTKVRVEFHEQIGHLEAQLATQEGLREK-----IS 694

  Fly   337 AIEKSKTLRVLNVETNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVE--- 398
            |:|:.:.::                                |:|...:|.:| |.||:.|:|   
 Frog   695 ALERQQKVQ--------------------------------SHQHREILLDK-ESEISTLMEKLR 726

  Fly   399 -KNSSLLRLGLHLEFNDARHRVAAHLQRNI 427
             |::.:||:.     .:..|| |..||..|
 Frog   727 LKDAEILRIR-----EEEAHR-ACLLQNAI 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 35/197 (18%)
LRR_RI <285..421 CDD:238064 33/153 (22%)
lrrc45XP_012827024.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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