DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and tmod1

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_005159867.1 Gene:tmod1 / 100149766 ZFINID:ZDB-GENE-090312-131 Length:378 Species:Danio rerio


Alignment Length:345 Identity:132/345 - (38%)
Similarity:198/345 - (57%) Gaps:11/345 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 KDLSEYDDVDVESLLAQLSPEEITIL---AKEVDPDDNFLPPDQRNSYECTKEATGPLNRKQLIE 154
            |::.:|.|||.:.||.:||.||:..|   .:|:|||:..||...|...:..|..||...|..|:.
Zfish     4 KEMEKYRDVDEDELLQKLSEEELRRLEDELEELDPDNALLPAGYRQRDQTKKAPTGTFQRDNLLA 68

  Fly   155 HINKQAIETPDQPEFEPFVQGKVRGKKWVPPPRDARDIEAEEQIAIDMGEEYEHALNDATQEEII 219
            |:.|||.|.||:.:..|:. |:.|||.|||..:....:..:    :.:..|.|.||:.||..|:.
Zfish    69 HLEKQAKEHPDRDDLVPYT-GEKRGKPWVPKSKVVDPLLED----VTLEPELEEALSSATDAELC 128

  Fly   220 DLAAILGFHSMMNQDQYHASLLNKGQPVGLGWDGITKSTQQKLFPMDPPNNTDVEESIKRVKDDD 284
            |:|||||.|::|:..||:.:|.:.......|.:.:.:.||.|..|.:.||:|||||:::|||.:|
Zfish   129 DIAAILGMHTLMSNQQYYEALASSTIVNKQGLNSVIQCTQYKPVPDEEPNDTDVEETLQRVKSND 193

  Fly   285 SKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIEKSKTLRVLNV 349
            ..|.::||||||||....|:....||..|..:|.||:......|..|..||..::.:.||:.|||
Zfish   194 PDLTEVNLNNIKNIPVPTLKAYAEALKGNSVVERLSIVGTRSNDPVAFALAEMLKVNTTLKSLNV 258

  Fly   350 ETNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKNSSLLRLGLHLEFND 414
            |:|||:...::.||:||....|::|.:..|| |..||||:||||.:::|||::||:.|.|.....
Zfish   259 ESNFITGAGVLALVEALKSNTTLQELKIDNQ-SQPLGNKVEMEIANILEKNTTLLKFGYHFTQQG 322

  Fly   415 ARHRVAAHLQRNID--RIFR 432
            .|.|.:..:..|.|  |:.|
Zfish   323 PRLRGSNAMMNNNDMARVVR 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 54/142 (38%)
LRR_RI <285..421 CDD:238064 55/135 (41%)
tmod1XP_005159867.1 Tropomodulin 3..142 CDD:308723 54/142 (38%)
LRR_RI <190..>313 CDD:330982 52/123 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593550
Domainoid 1 1.000 134 1.000 Domainoid score I4956
eggNOG 1 0.900 - - E1_KOG3735
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20701
Inparanoid 1 1.050 222 1.000 Inparanoid score I3510
OMA 1 1.010 - - QHG47963
OrthoDB 1 1.010 - - D1025132at2759
OrthoFinder 1 1.000 - - FOG0001180
OrthoInspector 1 1.000 - - otm25480
orthoMCL 1 0.900 - - OOG6_105629
Panther 1 1.100 - - O PTHR10901
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2851
SonicParanoid 1 1.000 - - X804
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.840

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