DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and tmod2

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001106513.1 Gene:tmod2 / 100127704 XenbaseID:XB-GENE-944511 Length:352 Species:Xenopus tropicalis


Alignment Length:358 Identity:128/358 - (35%)
Similarity:202/358 - (56%) Gaps:26/358 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 YGKDLSEYDDVDVESLLAQLSPEEITIL---AKEVDPDDNFLPPDQRNSYECTKEATGPLNRKQL 152
            :.||..:|.:::.:.:|.:||.:|:..|   .:|:||::..||...|...:.||||:|..:|:.|
 Frog     5 FRKDYDKYKNINEDEILNKLSADELKQLENVLEELDPENALLPAGFRQKDQTTKEASGTFDREHL 69

  Fly   153 IEHINKQAIETPDQPEFEPFVQGKVRGKKWVPPPRDARDIEAEEQIAIDMGEEYEHALNDATQEE 217
            :.::.|:|:|..|:.::.||. |:.:||.:||   ....||.:.:..:.:..|.|.||..||..|
 Frog    70 LAYLQKEALEHQDREDYVPFT-GEKKGKVFVP---KHMPIERQPEEKVTLEPELEEALASATDTE 130

  Fly   218 IIDLAAILGFHSMMNQDQYHASLLNKGQPVGLGWDG--------ITKSTQQKLFPMDPPNNTDVE 274
            :.|||.:||.....::.|        |...|...||        :.|:.:.|....||||.|:||
 Frog   131 LSDLATVLGVQHFASRPQ--------GNENGNNDDGERRDLRIDVVKAEKVKPTFEDPPNPTNVE 187

  Fly   275 ESIKRVKDDDSKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIE 339
            ||::|:|::|..|:|:||||||||....|::...||..|.|::..||......|..||.||..::
 Frog   188 ESLQRLKENDPFLLDINLNNIKNIPIPTLKEFAKALETNTHVKAFSLAATRSNDPVALALADMLK 252

  Fly   340 KSKTLRVLNVETNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKNSSLL 404
            .:|||:.||||||||:...|:.||:||.:..|:.|.:.:|||.. ||..:||||..::|:||::|
 Frog   253 VNKTLKGLNVETNFITGSGILALVEALKQNKTLTEIKIANQRQQ-LGTAVEMEIAQMLEENSAIL 316

  Fly   405 RLGLHLEFNDARHRVAAHLQRNID--RIFRVQK 435
            :.|........|.|||..:.:|.|  |..||::
 Frog   317 KFGYQFTHQGPRIRVATAITKNNDLVRQKRVER 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 46/144 (32%)
LRR_RI <285..421 CDD:238064 57/135 (42%)
tmod2NP_001106513.1 Tropomodulin 5..142 CDD:367418 46/140 (33%)
LRR_RI <216..>288 CDD:393385 29/71 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 132 1.000 Domainoid score I5059
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I3440
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1025132at2759
OrthoFinder 1 1.000 - - FOG0001180
OrthoInspector 1 1.000 - - otm47659
Panther 1 1.100 - - LDO PTHR10901
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2851
SonicParanoid 1 1.000 - - X804
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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