DRSC/TRiP Functional Genomics Resources

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Protein Alignment tmod and cav3.2

DIOPT Version :9

Sequence 1:NP_001247372.1 Gene:tmod / 43633 FlyBaseID:FBgn0082582 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001096351.1 Gene:cav3.2 / 100124941 XenbaseID:XB-GENE-5815090 Length:153 Species:Xenopus tropicalis


Alignment Length:52 Identity:16/52 - (30%)
Similarity:26/52 - (50%) Gaps:3/52 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PAKLYGKDLSEYDDVDVESLLAQLSPEEITILAKEVDPDDNFLPPDQRNSYE 138
            |||   :|.|..:.:..|..|.|..|::|.....:||.:|....||..:|::
 Frog     9 PAK---QDKSNTEALTKEIDLVQRDPKKINQEVVQVDFEDVIAEPDGTHSFD 57

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tmodNP_001247372.1 Tropomodulin 91..233 CDD:281268 13/48 (27%)
LRR_RI <285..421 CDD:238064
cav3.2NP_001096351.1 Caveolin 20..150 CDD:366489 11/38 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165175685
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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