DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jdp and dnajb4

DIOPT Version :10

Sequence 1:NP_651807.1 Gene:jdp / 43630 FlyBaseID:FBgn0027654 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001003455.1 Gene:dnajb4 / 445061 ZFINID:ZDB-GENE-040801-192 Length:340 Species:Danio rerio


Alignment Length:190 Identity:45/190 - (23%)
Similarity:75/190 - (39%) Gaps:62/190 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EDFYGLLHCDENSSPEQIQAEYKVLALQYHPDKNSGDKEAEAKFQQLKEAKETLCDPEKRAIYDK 80
            :|:|.:|...:.:|.:.|:..|:..||::|||||.. ..||.||:::.||.|.|.||:||.|||:
Zfish     3 KDYYKILGITKGASDDDIKKAYRKQALKWHPDKNKA-ANAEEKFKEVAEAYEVLSDPKKREIYDQ 66

  Fly    81 WRNSGISMSYKQWLGMKEHVGQVRRYTIAEKVDKESMHWVTPKTKDRMLPETGGAAAQGPGTGAG 145
            :...|:                                            :.||.|:.|||    
Zfish    67 YGEEGL--------------------------------------------KGGGGASDGPG---- 83

  Fly   146 CSSGGLTAASPNPAHRRASE--GGAA---LYYGSR-----KGEWGGENTDVANKFRNYEI 195
               |..|.......|...:.  |||:   :::|.:     :.:...:..|....|.::.|
Zfish    84 ---GNFTYTFHGDPHATFATFFGGASPFEVFFGRKVNGRDEDDMEVDGNDPFGSFTSFNI 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jdpNP_651807.1 DnaJ 17..79 CDD:395170 26/61 (43%)
dnajb4NP_001003455.1 DnaJ_bact 4..334 CDD:274090 45/189 (24%)

Return to query results.
Submit another query.