DRSC/TRiP Functional Genomics Resources

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Protein Alignment jdp and Dnajc4

DIOPT Version :10

Sequence 1:NP_651807.1 Gene:jdp / 43630 FlyBaseID:FBgn0027654 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001426941.1 Gene:Dnajc4 / 361717 RGDID:1308693 Length:260 Species:Rattus norvegicus


Alignment Length:118 Identity:28/118 - (23%)
Similarity:43/118 - (36%) Gaps:29/118 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DFYGLLHCDENSSPEQIQAEYKVLALQYHPDKNSGDKEAEAKFQQLKEAKETLCDPEKRAIYD-- 79
            ::|.||.....:|.|:|:..:...:.:.|||::.|:....::|.:|.||...|...|.|..||  
  Rat    53 NYYELLGVHPGASAEEIKRAFFTKSKELHPDRDPGNPALHSRFVELSEAYRVLSREESRRNYDHQ 117

  Fly    80 -------KWRNSGISMSYKQWLGMKEHVGQVRRYTIAEKVDKESMHWVTPKTK 125
                   |...|.....|||                    ...|..|.||..:
  Rat   118 LHSASPSKSSGSTAEPKYKQ--------------------QTHSSPWETPNAE 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jdpNP_651807.1 DnaJ 17..79 CDD:395170 17/61 (28%)
Dnajc4NP_001426941.1 None

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