DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9698 and P4ha1

DIOPT Version :9

Sequence 1:NP_651806.2 Gene:CG9698 / 43629 FlyBaseID:FBgn0039784 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_742059.2 Gene:P4ha1 / 64475 RGDID:621000 Length:534 Species:Rattus norvegicus


Alignment Length:533 Identity:166/533 - (31%)
Similarity:270/533 - (50%) Gaps:52/533 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 FFSSIHEMTKVFGYEQKMVLHMQKFLSDNQDKLDFLKARLREFENERNEAREWGPSYFESPINKY 89
            ||:||.:||.:...|:.:|..::.::...:|||:.:|....:.:...:.|.:....:...|:|.:
  Rat    21 FFTSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRLTSTATKDPEGFVGHPVNAF 85

  Fly    90 LLNKRLTVDWQRVENLMATSTGEKPLTRLRKFRNRETMPDKKELEGAIDGLLRLQYVYRLKAKDL 154
            .|.|||..:|..:|||:.....:..::.|.  ..|:..|:.::..||...|.|||..|.|....:
  Rat    86 KLMKRLNTEWSELENLILKDMSDGFISNLT--IQRQYFPNDEDQVGAAKALFRLQDTYNLDTNTI 148

  Fly   155 ARGILDGVDYGTQLNSEHCVDIARLALRDQHPRLAHSWLIEANDRLTGGEKEEQLKPQIL----- 214
            ::|.|.||.:.:.|.:|.|.::.::|..:........|:.:|..:|..||.....|..:|     
  Rat   149 SKGNLPGVKHKSFLTAEDCFELGKVAYTEADYYHTELWMEQALMQLEEGEMSTVDKVSVLDYLSY 213

  Fly   215 ----------ALLVQAKKELEDFRGLNDTYQELIG-------IQSASEEHAKNYETFLNALSEKA 262
                      |||: .||.||    |:..:|...|       |.|..::..|:..   ...|::.
  Rat   214 AVYQQGDLDKALLL-TKKLLE----LDPEHQRANGNLVYFEYIMSKEKDANKSAS---GDQSDQK 270

  Fly   263 LLNESKPI-LEHAPIPEEGEPVGEFQAYSLTCSGHW-RLTPKEQRHLRCGYVT-ETHPFLWIAPL 324
            ...:.|.| :::.|         |.|.|.:.|.|.. ::||:.|:.|.|.|.. ..:|...:||.
  Rat   271 TTPKKKGIAVDYLP---------ERQKYEMLCRGEGIKMTPRRQKRLFCRYHDGNRNPKFILAPA 326

  Fly   325 KAEELFQDPLLVLYHDVIYQSEIDVIRKLTENRLMRATITSHN----ESVVSNVRTSQFTFIPVT 385
            |.|:.:..|.::.:||:|..:||::::.|.:.||.|||:  |:    :...:..|.|:..::...
  Rat   327 KQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATV--HDPETGKLTTAQYRVSKSAWLSGY 389

  Fly   386 AHKVLSTIDQRVADMTNLNMKYAEDHQFANYGIGGHYGQHMDWFYQTTFDAGLVSSPEMGNRIAT 450
            ...|:|.|:.|:.|:|.|::..||:.|.||||:||.|..|.|:..:...||  ......||||||
  Rat   390 EDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDA--FRELGTGNRIAT 452

  Fly   451 VLFYLSDVAQGGGTAFPQLRTLLKPKKYAAAFWHNLHASGVGDVRTQHGACPIIAGSKWVQNRWI 515
            .|||:|||:.||.|.||::...:.|||..|.||:||.|||.||..|:|.|||::.|:|||.|:|:
  Rat   453 WLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL 517

  Fly   516 RENDQSDRRPCEL 528
            .|..|..||||.|
  Rat   518 HERGQEFRRPCTL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9698NP_651806.2 P4Ha_N 28..159 CDD:285528 33/130 (25%)
P4Hc 345..516 CDD:214780 73/174 (42%)
P4ha1NP_742059.2 P4Ha_N 25..112 CDD:400573 20/86 (23%)
TPR 205..238 9/37 (24%)
P4Hc 345..518 CDD:214780 73/176 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100878
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.820

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