DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9698 and p4ha3

DIOPT Version :9

Sequence 1:NP_651806.2 Gene:CG9698 / 43629 FlyBaseID:FBgn0039784 Length:547 Species:Drosophila melanogaster
Sequence 2:XP_021322008.1 Gene:p4ha3 / 563281 ZFINID:ZDB-GENE-041010-4 Length:616 Species:Danio rerio


Alignment Length:547 Identity:167/547 - (30%)
Similarity:253/547 - (46%) Gaps:76/547 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FPVFSVLFLLFHQAIPSVSGVEFFSSIHEMTKVFGYEQKMVLHMQKFLSDNQDKLDFLK---ARL 64
            |.:|.||:||   .:|..|..|.|:|:..:.:....|:|::.|:..::.....:|:.:|   :|:
Zfish     5 FTLFIVLYLL---NMPDESFGEMFTSMLSVNQAVSAERKLIDHLIIYIEHEAQRLEDIKRFFSRV 66

  Fly    65 REFE----NERNEAREWGPSYFESPINKYLLNKRLTVDWQRVENLMATSTGEKPLTRLRK-FRNR 124
            ....    ||.::.       ..:||..:.|.|||..:|.   |::.::..|:.:..||: :|..
Zfish    67 TSLHDGIYNEPSDP-------IANPIAAFKLVKRLKSEWL---NVVHSTEAEENIKVLREDYRRM 121

  Fly   125 E-TMPDKKELEGAIDGLLRLQYVYRLKAKDLARG----ILDGVDY-----GTQLNSEHCVDIARL 179
            | ::|..::|.||..||:|||.||.|..:.|.||    |.|.||:     ...|:.:.|..:.::
Zfish   122 ESSLPKLEDLRGAAHGLMRLQDVYNLHVESLVRGHFQQISDPVDFYKLSVSDMLSGDDCFLVGKV 186

  Fly   180 A--LRDQHPRLAHS--WLIEANDRLTGGEKEEQLKPQILALLVQAKKEL--EDFRGLNDTYQELI 238
            |  |.|.:    ||  |..||.....|.|    ..|:....|..|...|  ..|:..|.::    
Zfish   187 AYDLEDYY----HSVLWFEEAVRLFRGTE----WSPENEGTLEDALDHLAFSHFKTGNISH---- 239

  Fly   239 GIQSASEE----HAKNYETFLNALSEKALLNESKPILEHAPIPEEG----EPVGEF----QAYSL 291
             ..|.|.|    ...|.....|....:.|||      |:.|....|    .|.|.:    .||..
Zfish   240 -ALSLSRELLLHDPMNRRVHFNVEKYEKLLN------ENLPATSSGLTLKRPDGIYLRTRNAYEQ 297

  Fly   292 TCSGHWRLTPK--EQRHLRCGYVTETHPFLWIAPLKAEELFQDPLLVLYHDVIYQSEIDVIRKLT 354
            .|..... .||  |...|.|.|.|...|.|::.|::.|.:...|.:||:|..:.|:|...|||..
Zfish   298 LCQTKGS-QPKHFENPSLFCDYFTNGSPALFLQPIRREIISLQPYVVLFHGFVTQAEAKNIRKYA 361

  Fly   355 ENRLMRATITSHNESVVSNVRTSQFTFIPVTAHKVLSTIDQRVADMTNLNMK--YAEDHQFANYG 417
            ...|.|:.:.|......:..|.|:..::..:||:|:..:|||:..:|.||::  |||..|..|||
Zfish   362 MPGLRRSVVASGMNQATAEYRISKSAWLKESAHEVVGKLDQRITLVTGLNVQPPYAEYLQVVNYG 426

  Fly   418 IGGHYGQHMDWFYQTTFDAGLVSSPEMGNRIATVLFYLSDVAQGGGTAFPQLRTLLKPKKYAAAF 482
            |||||..|.|   ..|.|:..:...:.|||:||::.|||.|..||.|||......:...:.||.|
Zfish   427 IGGHYEPHFD---HATSDSSPLYRLKTGNRVATIMIYLSPVQAGGSTAFIYANFSVPVVQNAALF 488

  Fly   483 WHNLHASGVGDVRTQHGACPIIAGSKW 509
            |.|||.:|.|:|.|.|..||:|.|:||
Zfish   489 WWNLHKNGQGNVDTLHAGCPVIVGNKW 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9698NP_651806.2 P4Ha_N 28..159 CDD:285528 37/143 (26%)
P4Hc 345..516 CDD:214780 66/167 (40%)
p4ha3XP_021322008.1 P4Ha_N 27..157 CDD:311993 37/139 (27%)
P4Hc 350..519 CDD:214780 67/169 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583408
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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