DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9698 and p4ha2

DIOPT Version :9

Sequence 1:NP_651806.2 Gene:CG9698 / 43629 FlyBaseID:FBgn0039784 Length:547 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:530 Identity:156/530 - (29%)
Similarity:256/530 - (48%) Gaps:43/530 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EFFSSIHEMTKVFGYEQKMVLHMQKFLSDNQDKLDFLKARLREFENERNEAREWGPSYFESPINK 88
            |.|:|..:||.:...|:.::..:::::.:.:::|..:|....|.:...:.:......|...|:|.
 Frog    22 EVFTSTGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDELSSRSTADPEGYLGHPVNA 86

  Fly    89 YLLNKRLTVDWQRVENLMATSTGEKPLTRLRKFRNRETMPDKKELEGAIDGLLRLQYVYRLKAKD 153
            |.|.||...||..:|||:...:.:..:... .|: ||..|.:::..||...|:|:|..|:|....
 Frog    87 YKLVKRFNTDWSSLENLVLQDSAKGFIANF-TFQ-REYFPTEEDETGAARALMRIQDTYKLDPDV 149

  Fly   154 LARGILDGVDYGTQLNSEHCVDIARLALRD---QHPRLAHSWLIEANDRLTGGEKEEQLKPQILA 215
            :|:|.|.|.:|.:.|:::....:.::|..|   .|..|   |:.:|..::..||.....|..:|.
 Frog   150 IAKGKLPGTNYISSLSADDSFGMGKIAYHDGDYYHTVL---WMQQALKQMDEGEDAVVNKVDVLD 211

  Fly   216 LLVQAKKELEDFRGLNDTYQELIGIQSASEEHAKNYETFLNALSEKALL----NES--------K 268
            .|.....:|.|.....:..:.|:.: ..:.:.|.|...:...:.||...    |||        :
 Frog   212 YLSYTVFQLGDVPRALELTKRLLAL-DPNHDRAVNNLKYFEKMQEKQKAELKQNESTNTESATRQ 275

  Fly   269 PILEHAPIPEEGEPVGEFQAYSLTCSGHW-RLTPKEQRHLRCGYVT-ETHPFLWIAPLKAEELFQ 331
            |.:...|:    :.:.|...|...|.|.. ::.|:.||.|.|.|.. ...|:|.::|:|.|:.:.
 Frog   276 PGVYSRPL----DYLPERDVYEALCRGEGVKMNPRRQRRLFCRYHNGNRSPYLILSPVKVEDEWD 336

  Fly   332 DPLLVLYHDVIYQSEIDVIRKLTENRLMRATITSHNESV--VSNVRTSQFTFIPVTAHKVLSTID 394
            .|.:|.|.:.:...||..|::|.:.:|.|||:......|  |:|.|.|:..::......|::.::
 Frog   337 SPRIVRYLNALSDEEIAKIKELAKPKLARATVRDPKTGVLSVANYRVSKSAWLEENDDPVIARVN 401

  Fly   395 QRVADMTNLNMKYAEDHQFANYGIGGHYGQHMDWFYQTTFDAGLVSSPEM------GNRIATVLF 453
            .|:..:|.|.:..||..|.||||:||.|..|        ||......|::      |||:||.|.
 Frog   402 LRMQAITGLTVDTAELLQVANYGMGGQYEPH--------FDFSRKDEPDVFKRLGTGNRVATFLN 458

  Fly   454 YLSDVAQGGGTAFPQLRTLLKPKKYAAAFWHNLHASGVGDVRTQHGACPIIAGSKWVQNRWIREN 518
            |:|||..||.|.||.....:.|||..|.||:||..||.||.||:|.|||::.|||||.|:|..|.
 Frog   459 YMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGSKWVSNKWFHER 523

  Fly   519 DQSDRRPCEL 528
            .|...|||.|
 Frog   524 GQEFLRPCGL 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9698NP_651806.2 P4Ha_N 28..159 CDD:285528 32/130 (25%)
P4Hc 345..516 CDD:214780 71/178 (40%)
p4ha2XP_012814344.2 P4Ha_N 27..113 CDD:400573 18/85 (21%)
TPR repeat 166..201 CDD:276809 7/37 (19%)
TPR repeat 206..236 CDD:276809 6/29 (21%)
P4Hc 348..521 CDD:214780 71/180 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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