DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9698 and PH4alphaNE1

DIOPT Version :9

Sequence 1:NP_651806.2 Gene:CG9698 / 43629 FlyBaseID:FBgn0039784 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster


Alignment Length:560 Identity:171/560 - (30%)
Similarity:266/560 - (47%) Gaps:79/560 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VLFLLFHQAIPSVSGVEFFSSIHEMTKVFGYEQKMVLHMQKFLSDNQDKLDFLKARLREFENERN 72
            ::|||...::.|    ::||||..:..:...||.:...::..::..|..|..|::.|...|.|..
  Fly    10 LIFLLAQGSLAS----DYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEHT 70

  Fly    73 EAREWGPSYFESPINKYLLNKRLTVDWQRVENLMATSTGEKPLTRLRKFRNRETMPDKKELEGAI 137
            .|.....:|..:|:|.|.|.|||..||..:|..:.....|......|::  ..:.|.::::|||.
  Fly    71 MAASDTENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEMNFNATREY--GLSYPSQEDVEGAA 133

  Fly   138 DGLLRLQYVYRLKAKDLARGILDGVDYGTQLNSEHCVDIARLALRDQHPRLAHSWLIEANDRLTG 202
            ..|:|||..|:|....:|:|||:||.||:.::.:.|.::.:.....:.......||.|:.:||  
  Fly   134 LALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRESMERL-- 196

  Fly   203 GEKEEQLKPQILA------------LLVQAKK--ELEDFRGLNDTYQELIGIQSASEEHAKNYET 253
             .::....|..||            :...||.  :|.||    ||..|                 
  Fly   197 -RRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDF----DTAFE----------------- 239

  Fly   254 FLNALSEKALLNESKPILE-H------APIPEEGEPV------------GEFQAYSLTCSGHWRL 299
                ||::.|..:.|.|.. |      || ||:.:.|            .||..|...|.|  .:
  Fly   240 ----LSQRVLQFDPKRIRNWHLGDKGTAP-PEDIDDVYLPKHSDSYSLSQEFAKYEKVCRG--EV 297

  Fly   300 TPKEQRHLRCGYVTETHPFLWIAPLKAEELFQDPLLVLYHDVIYQSEIDVIRKLTENRLMRATIT 364
            .|..::.|||.|....||:.::||||.||...||.:..:||::...:|..:|::...|:.|:|:.
  Fly   298 HPIVRQELRCRYSRGNHPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTVN 362

  Fly   365 --SHNESVVSNVRTSQFTFIPVTAHKVLSTIDQRVADMTNLNMKYAEDHQFANYGIGGHYGQHMD 427
              ...:...|..|.|:..::...:|..:..:.:.:.|.|.|:..:.|..|.||||:||||..|.|
  Fly   363 PLPGGQLKKSAFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWD 427

  Fly   428 WFYQTT-FDAGLVSSPEMGNRIATVLFYLSDVAQGGGTAFPQLRTLLKPKKYAAAFWHNLHASGV 491
            :|.... :.|      |.||||||.:||||:|.|||.||||.|...:||:.....||:|||.|..
  Fly   428 FFRDPNHYPA------EEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLD 486

  Fly   492 GDVRTQHGACPIIAGSKWVQNRWIRENDQSDRRPCELWDD 531
            .|.||:|..||::.||||:.|.||.|..|:..|||:::.|
  Fly   487 KDYRTKHAGCPVLKGSKWIGNVWIHEVTQTFARPCDVFRD 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9698NP_651806.2 P4Ha_N 28..159 CDD:285528 36/130 (28%)
P4Hc 345..516 CDD:214780 66/173 (38%)
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 36/130 (28%)
P4Hc 341..511 CDD:214780 66/175 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461874
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

Return to query results.
Submit another query.