DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9698 and CG4174

DIOPT Version :9

Sequence 1:NP_651806.2 Gene:CG9698 / 43629 FlyBaseID:FBgn0039784 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_001034031.2 Gene:CG4174 / 40023 FlyBaseID:FBgn0036793 Length:473 Species:Drosophila melanogaster


Alignment Length:506 Identity:121/506 - (23%)
Similarity:200/506 - (39%) Gaps:118/506 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 YEQKMVLHMQKFLSDNQDKLDFLKAR-------------LREFENERNEAREWGPSYFESPINKY 89
            |::.:..|:||.....:...:.||:.             ||...|      :| |.||.      
  Fly    53 YKKVLKKHLQKIRRAIRQSEELLKSTKTSPRNLIYGYKVLRHLHN------DW-PQYFR------ 104

  Fly    90 LLNKRLTVDWQRVENLMATSTGEKPLTRLRKFRNRETMPDKKELEGAIDGLLRLQYVYRLKAKDL 154
            ||.|.|.::...|..::.|.                 .|...:.|.::..:.|||.||.|.:..:
  Fly   105 LLKKDLGLEQIAVSQMLLTQ-----------------QPTSVDFEESMGAMHRLQTVYNLDSYAM 152

  Fly   155 ARGILDGVDYGTQ-LNSEHC--VDIARLALRDQHPRLAHSWLIEANDRLTGGEKEEQLK------ 210
            ..|.:|..|...: .:::.|  :.:..|.|:|.:.  :.:||..|..........|.||      
  Fly   153 TEGFIDDKDKNIRNWSADECLMLGLMYLFLKDYNQ--SENWLELALYHYDDNVSPEVLKIKLWNY 215

  Fly   211 PQILALLVQAKKELEDFRGLNDTYQELIGIQSASEEHAKNYETFLNAL-------SEKALLNESK 268
            |.:|..||:|.|.|..:........||:.|.       .|:...|..|       |..|.|.:.|
  Fly   216 PNLLESLVEANKGLGHYFEAKKYANELLSIN-------PNHTYMLTQLPKLKHLQSNPAKLTKPK 273

  Fly   269 PILEHAPIPEEGEPVGEFQAYSLTCSGHWRLTPKEQRHLRCGYVTETHPFLWIAPLKAEELFQDP 333
            .:               ||.....||..:|   ::...|.|.||..| |||.:||||.|||...|
  Fly   274 KV---------------FQLQKEICSKRYR---RKSGVLVCRYVDWT-PFLKLAPLKMEELSMKP 319

  Fly   334 LLVLYHDVIYQSEIDVIRKLTENRLMRATITSHNESV-VSNVRTSQFTFIPVTAHKVLSTIDQRV 397
            .:.:::..:.|.:|:|::.::..:|.|....|.|.|. :.|:.||        .|.|:..:::.:
  Fly   320 YISIFYGFLGQKDIEVLKNVSRPKLQRIEHLSGNCSCKIGNLSTS--------LHDVVRKVNELI 376

  Fly   398 ADMTNLNMKYAEDHQFANYGIGGHYGQHMDWFYQTTFDAGLVSSPEMGNRIATVLFYLSDVAQGG 462
            ..:|...:|..:..:..||||.|:|..               ..|::.|: |....:||:..:||
  Fly   377 LGITGFPLKGNQMLEVINYGIAGNYNP---------------EEPKIHNK-ANAFIFLSNAGKGG 425

  Fly   463 GTAFPQLRTLLKPKKYAAAFWHNLHASGVGDVRTQHGACPIIAGSKWVQNR 513
            ...||.....::|:|.:...|.||..|.:      :..|||:.|:.||.|:
  Fly   426 EIVFPSRHLKVRPRKGSMLVWENLKKSLI------YHQCPILKGNMWVANK 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9698NP_651806.2 P4Ha_N 28..159 CDD:285528 28/133 (21%)
P4Hc 345..516 CDD:214780 42/170 (25%)
CG4174NP_001034031.2 P4Ha_N 33..157 CDD:285528 28/133 (21%)
TPR repeat 169..197 CDD:276809 7/29 (24%)
TPR repeat 202..245 CDD:276809 12/42 (29%)
2OG-FeII_Oxy <362..470 CDD:304390 33/137 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461715
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.000

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