DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9698 and P4ha3

DIOPT Version :9

Sequence 1:NP_651806.2 Gene:CG9698 / 43629 FlyBaseID:FBgn0039784 Length:547 Species:Drosophila melanogaster
Sequence 2:XP_038938408.1 Gene:P4ha3 / 361612 RGDID:735150 Length:549 Species:Rattus norvegicus


Alignment Length:483 Identity:129/483 - (26%)
Similarity:213/483 - (44%) Gaps:77/483 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FSSIHEMTKVFGYEQKMVLHMQKFLSDNQDKLDFLKARLREFENERNEAREWGPSYFE------- 83
            ||::..:.:....|::::..::::|...:       ||||:.....::..    |..|       
  Rat    31 FSALTSVARALAPERRLLGTLRRYLRGEE-------ARLRDLTRFYDKVL----SLHEDLKIPVV 84

  Fly    84 SPINKYLLNKRLTVDWQRV-------ENLMATSTGEKPLTRLRKFRNRETMPDKKELEGAIDGLL 141
            :|:..:.|.|||..||:.|       ||:.|...|.:.:        .:.:|..::||||...|:
  Rat    85 NPLLAFTLIKRLQSDWRNVVHSLEATENIRALKDGYEKV--------EQDLPAFEDLEGAARALM 141

  Fly   142 RLQYVYRLKAKDLARGILDGVDYGT-----------QLNSEHCVDIARLALRDQHPRLAHSWLIE 195
            |||.||.|..|.||:|:...|...:           .|.::.|..:.::|........|..||.|
  Rat   142 RLQDVYMLNVKGLAQGVFQRVTGSSITDLYSPRQLFSLTADDCFQVGKVAYDTGDYYHAIPWLEE 206

  Fly   196 AND--RLTGGE---KEEQLKPQILALLVQAKKELEDFRGLNDTYQELIGIQSASEEHAKNYETFL 255
            |..  |.:.||   ::|......|..|..|..::.:........:|.:.....::..|:|...:.
  Rat   207 AVSLFRRSYGEWKTEDEASLEDALDYLAFACYQVGNVSCALSLSREFLVYSPDNKRMARNVLKYE 271

  Fly   256 NALSEKALLNESKPILEHAPIPEEGEPVGEFQAYSLTCS------GHWRLTPKEQRHLRCGYVTE 314
            ..|:|...|..::..::...:|.    :.....|...|.      .|:::.     .|.|.|.|.
  Rat   272 RLLAENGHLMAAETAIQRPNVPH----LQTRDTYEGLCQTLGSQPTHYQIP-----SLYCSYETN 327

  Fly   315 THPFLWIAPLKAEELFQDPLLVLYHDVIYQSEIDVIRKLTENRLMRATITSHNESVVSNVRTSQF 379
            :.|:|.:.|.:.|.:...||:.||||.:...|...||:|.|..|.|:.:.|..:.:....|.|:.
  Rat   328 SSPYLLLQPARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVASGEKQLQVEYRISKS 392

  Fly   380 TFIPVTAHKVLSTIDQRVADMTNLNMK--YAEDHQFANYGIGGHYGQHMDWFYQTTFDAGLVSSP 442
            .::..|...||.|:|:|:|.:|.|:::  |||..|..||||||||..|.|       .|...|||
  Rat   393 AWLKDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFD-------HATSPSSP 450

  Fly   443 ----EMGNRIATVLFYLSDVAQGGGTAF 466
                :.|||:||::.|||.|..||.|||
  Rat   451 LYKMKSGNRVATLMIYLSSVEAGGATAF 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9698NP_651806.2 P4Ha_N 28..159 CDD:285528 36/144 (25%)
P4Hc 345..516 CDD:214780 51/128 (40%)
P4ha3XP_038938408.1 P4Ha_N 34..108 CDD:400573 16/84 (19%)
P4Hc 356..>478 CDD:214780 49/128 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343169
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.