DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and AT5G66060

DIOPT Version :9

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_201407.4 Gene:AT5G66060 / 836738 AraportID:AT5G66060 Length:289 Species:Arabidopsis thaliana


Alignment Length:210 Identity:64/210 - (30%)
Similarity:103/210 - (49%) Gaps:28/210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 EILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPSATTDPDASDDETQVDT---YRTSKSVWYSS 387
            ||:|.:|...:.|:.::::|...:...:|.||..|...     |::|...|   .|||...:.:.
plant    79 EIISWEPRASVYHNFLTKEECKYLIELAKPHMEKSTVV-----DEKTGKSTDSRVRTSSGTFLAR 138

  Fly   388 DFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDMLLSEKNRFNGTSDRIATTLFY 452
            ..:.|.::|.:|:.|.|.:.:...|..||::|.:|..:|.|.|..:.|.|..|| ..||||.|.|
plant   139 GRDKTIREIEKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNG-GQRIATVLMY 202

  Fly   453 LNEVRQGGGTYFP-------------------RLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTG 498
            |::|.:||.|.||                   :..|:|.|:.|.||.::::.........|||.|
plant   203 LSDVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLDPSSLHGG 267

  Fly   499 CPVIVGSKWVMSKWI 513
            |.||.|:||..:||:
plant   268 CAVIKGNKWSSTKWL 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528
TPR repeat 175..200 CDD:276809
TPR_16 176..254 CDD:290168
TPR repeat 219..249 CDD:276809
TPR_2 220..253 CDD:285020
P4Hc 342..513 CDD:214780 58/192 (30%)
AT5G66060NP_201407.4 PLN00052 74..288 CDD:177683 64/210 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

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