DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and AT5G18900

DIOPT Version :9

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_197391.1 Gene:AT5G18900 / 832008 AraportID:AT5G18900 Length:298 Species:Arabidopsis thaliana


Alignment Length:256 Identity:66/256 - (25%)
Similarity:105/256 - (41%) Gaps:39/256 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 VTSPFLQLAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPSATTDPDASDDETQVDTY 377
            ::|..:.:.|.|.:.:|..|...:....:::.|...:.:.:|..:..||..|.|:.  |::....
plant    25 ISSSSVFVNPSKVKQVSSKPRAFVYEGFLTELECDHMVSLAKASLKRSAVADNDSG--ESKFSEV 87

  Fly   378 RTSKSVWYSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDMLLSEKNRFNGT 442
            |||...:.|...:.....|.:::...|.|...:.|..||:.|..|..::.|.|....:.|...| 
plant    88 RTSSGTFISKGKDPIVSGIEDKISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNIVRG- 151

  Fly   443 SDRIATTLFYLNEVRQGGGTYFP---------------------RLNLTVFPQPGSALFWYNLDT 486
            ..|:||.|.||:.|.:||.|.||                     :..:.|.|:.|.||.::||..
plant   152 GHRMATILMYLSNVTKGGETVFPDAEIPSRRVLSENKEDLSDCAKRGIAVKPRKGDALLFFNLHP 216

  Fly   487 KGNDHMGSLHTGCPVIVGSKWVMSKWIN---------------DMGQEFTRPCVESSLSSN 532
            .......|||.|||||.|.||..:|||:               ||.:...|..|....:.|
plant   217 DAIPDPLSLHGGCPVIEGEKWSATKWIHVDSFDRIVTPSGNCTDMNESCERWAVLGECTKN 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528
TPR repeat 175..200 CDD:276809
TPR_16 176..254 CDD:290168
TPR repeat 219..249 CDD:276809
TPR_2 220..253 CDD:285020
P4Hc 342..513 CDD:214780 54/191 (28%)
AT5G18900NP_197391.1 PLN00052 33..298 CDD:177683 65/248 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

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