DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and AT4G33910

DIOPT Version :9

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_567941.1 Gene:AT4G33910 / 829535 AraportID:AT4G33910 Length:288 Species:Arabidopsis thaliana


Alignment Length:223 Identity:64/223 - (28%)
Similarity:98/223 - (43%) Gaps:31/223 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 LAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPSATTDPDASDDETQVDTYRTSKSVW 384
            :..|..::||..|..:...:..:.::...|...:|.::.|||.........|....| |||...:
plant    73 IGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALALRKGETAENTKGT-RTSSGTF 136

  Fly   385 YSSDFNDT--TKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDMLLSEKNRFNGT----- 442
            .|:....|  ...:..::..||.:..:..|.:.::.|.||..:::|.|:       ||.|     
plant   137 ISASEESTGALDFVERKIARATMIPRSHGESFNILRYELGQKYDSHYDV-------FNPTEYGPQ 194

  Fly   443 -SDRIATTLFYLNEVRQGGGTYFPRLN---------------LTVFPQPGSALFWYNLDTKGNDH 491
             |.|||:.|.||::|.:||.|.||..|               |.|.|:.|..|.:|::...|...
plant   195 SSQRIASFLLYLSDVEEGGETMFPFENGSNMGIGYDYKQCIGLKVKPRKGDGLLFYSVFPNGTID 259

  Fly   492 MGSLHTGCPVIVGSKWVMSKWINDMGQE 519
            ..|||..|||..|.|||.:|||.|..||
plant   260 QTSLHGSCPVTKGEKWVATKWIRDQDQE 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528
TPR repeat 175..200 CDD:276809
TPR_16 176..254 CDD:290168
TPR repeat 219..249 CDD:276809
TPR_2 220..253 CDD:285020
P4Hc 342..513 CDD:214780 55/193 (28%)
AT4G33910NP_567941.1 PLN00052 66..287 CDD:177683 62/221 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

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