DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and AT4G25600

DIOPT Version :10

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_194290.2 Gene:AT4G25600 / 828665 AraportID:AT4G25600 Length:291 Species:Arabidopsis thaliana


Alignment Length:258 Identity:60/258 - (23%)
Similarity:93/258 - (36%) Gaps:74/258 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 PPCCSGRC-------QVPRNLSNLYCVYNHVTSPFLQLAPIKTEILSIDPFVVLLHDMISQKEST 347
            ||.|||..       ::.....:....| .:.|.|:.  |.:...||..|.|.|....:|::|..
plant    20 PPFCSGGSRKELRDKEITSKSDDTQASY-VLGSKFVD--PTRVLQLSWLPRVFLYRGFLSEEECD 81

  Fly   348 LIRTSSKEHMLPSATTD---PDASDDETQVDT----YRTSKSVW-YSSDFNDTTKKITERLGDAT 404
            .:.:..||      ||:   .|| |.:||:|.    .....|.| :....|..:.|:.....:.:
plant    82 HLISLRKE------TTEVYSVDA-DGKTQLDPVVAGIEEKVSAWTFLPGENGGSIKVRSYTSEKS 139

  Fly   405 G--LDMNSTEFYQVINYGLGGFFETHLDMLLSEKNRFNGTSDRIATTLFYLNEVRQGGGTYFPRL 467
            |  ||....|...|::..|                        :||.:.||:...|||...||..
plant   140 GKKLDYFGEEPSSVLHESL------------------------LATVVLYLSNTTQGGELLFPNS 180

  Fly   468 NL-----------TVFPQPGSALFWY------NLDTKGNDHMGSLHTGCPVIVGSKWVMSKWI 513
            .:           .:.|..|:|:.::      :||.|      |.|..|||:.|...|.:|.|
plant   181 EMKPKNSCLEGGNILRPVKGNAILFFTRLLNASLDGK------STHLRCPVVKGELLVATKLI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..163 CDD:462433
TPR repeat 175..200 CDD:276809
TPR_16 176..254 CDD:433202
NrfG 217..>260 CDD:443378
TPR repeat 219..249 CDD:276809
P4Hc 342..513 CDD:214780 45/197 (23%)
AT4G25600NP_194290.2 PLN00052 55..291 CDD:177683 52/222 (23%)
Blue background indicates that the domain is not in the aligned region.

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