DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and AT-P4H-1

DIOPT Version :10

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_181836.1 Gene:AT-P4H-1 / 818910 AraportID:AT2G43080 Length:283 Species:Arabidopsis thaliana


Alignment Length:245 Identity:60/245 - (24%)
Similarity:104/245 - (42%) Gaps:42/245 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 RCQVPRNLSNLYCVYNHVTSPFLQLAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPS 360
            |.|..|.|.::....|...:..|::..:|.|::|..|.:::|||.:|.:|...::..::..:..|
plant    48 RGQNTRYLRDVSRWANDKDAELLRIGNVKPEVVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVS 112

  Fly   361 ATTDPDASDDETQVDTYRTSKSVWYSSDFNDTT--------------KKITERLGDATGLDMNST 411
            ...|            .:|.|.|  .||...::              :.|.:|:...:.:...:.
plant   113 TVVD------------VKTGKGV--KSDVRTSSGMFLTHVERSYPIIQAIEKRIAVFSQVPAENG 163

  Fly   412 EFYQVINYGLGGFFETHLDMLLSEKNRFNGTSDRIATTLFYLNEVRQGGGTYFP----------- 465
            |..||:.|....|::.|.|......|...| ..|:||.|.||.:..:||.||||           
plant   164 ELIQVLRYEPQQFYKPHHDYFADTFNLKRG-GQRVATMLMYLTDDVEGGETYFPLAGDGDCTCGG 227

  Fly   466 --RLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGSKWVMSKWI 513
              ...::|.|..|.|:.::::...|.....|:|.||.|:.|.||..:||:
plant   228 KIMKGISVKPTKGDAVLFWSMGLDGQSDPRSIHGGCEVLSGEKWSATKWM 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..163 CDD:462433
TPR repeat 175..200 CDD:276809
TPR_16 176..254 CDD:433202
NrfG 217..>260 CDD:443378
TPR repeat 219..249 CDD:276809
P4Hc 342..513 CDD:214780 46/197 (23%)
AT-P4H-1NP_181836.1 PLN00052 80..281 CDD:177683 52/213 (24%)
Blue background indicates that the domain is not in the aligned region.

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