DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and p4htma

DIOPT Version :10

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001074160.1 Gene:p4htma / 791209 ZFINID:ZDB-GENE-070112-2222 Length:478 Species:Danio rerio


Alignment Length:321 Identity:69/321 - (21%)
Similarity:105/321 - (32%) Gaps:124/321 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 LQLAPIKT---EILSIDPFVVLLHDMISQKESTLIRTSSKEHML--PSATTDPDASDDETQVDTY 377
            :.:.|.:|   ..||:.|.:..:...:|.:||.::...::...|  .|..|:||..:..||.:.:
Zfish   123 VSIVPDRTHNMRTLSLKPLLFEIPGFLSVEESNVVMQLAQLKGLTHSSLLTNPDQEEQLTQDELF 187

  Fly   378 --------------------RTSKSVWYSS---------------------DFNDTTKKITERLG 401
                                .::...|.||                     :|...:..:....|
Zfish   188 SLLDLNQDGLLQREEILSLSHSTDGSWLSSYNLRKIHTGLETNPSGVLSLQEFKRVSGGVLRYSG 252

  Fly   402 DATGLD-----------------------------------------MNSTEFYQVINYGLGGFF 425
            .|.|||                                         ::.:|..:|:.|..|.|.
Zfish   253 AAQGLDGHTKVRQRSTHTRLYLGEGTHHLLKSVRNRVTRLTRLPSSLVDLSEAMEVVRYEQGVFS 317

  Fly   426 E-------THLDMLLSEKNRFNGTSDRIA----TTLFYLNEVRQGGGTYFP-------------- 465
            .       ||.|...:..:....||:::|    |.|.|||....||.|.||              
Zfish   318 HAHHDSSPTHPDNSCTHTHLAANTSNQVACRYLTVLLYLNSADSGGETSFPVADNRTYEEEVLGD 382

  Fly   466 -------RLNLTVFPQPGSALFWYNLDTKGNDHMG-----SLHTGCPVIVGSKWVMSKWIN 514
                   :.||.|.|..|:||.|||..:.||..:|     |||..|.|..|.||..|.|:|
Zfish   383 LSQQYCDKGNLKVKPVAGTALLWYNHLSDGNGWVGELDEFSLHGDCLVTRGFKWTGSVWVN 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..163 CDD:462433
TPR repeat 175..200 CDD:276809
TPR_16 176..254 CDD:433202
NrfG 217..>260 CDD:443378
TPR repeat 219..249 CDD:276809
P4Hc 342..513 CDD:214780 62/291 (21%)
p4htmaNP_001074160.1 XopAW 169..>240 CDD:469301 9/70 (13%)
PLN00052 <248..471 CDD:177683 50/196 (26%)
Blue background indicates that the domain is not in the aligned region.

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