DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and PH4alphaNE1

DIOPT Version :9

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster


Alignment Length:530 Identity:151/530 - (28%)
Similarity:259/530 - (48%) Gaps:24/530 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVLLGMLYLSLSFGQLRENNAQQRFARSVVNMDDMLNLEDDLVSNVEKLAEALARKAKTIKWGVF 70
            ::|:|:::| |:.|.|..:     :..|:..::|:|:.|..|...:.....|:....:.::..:.
  Fly     5 VLLVGLIFL-LAQGSLASD-----YFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELS 63

  Fly    71 KMMKRRQEYKSSMEIF-ANPIDTFSLIRHMQSNWLMWLLYLETPVGQEELFFVDSRMPLL--PKY 132
            .:.|......|..|.: .||::.:.|::.:.::|.  |:.....:..||:.|..:|...|  |..
  Fly    64 SIEKEHTMAASDTENYLTNPVNVYRLMKRLHTDWS--LMEGRVQLMAEEMNFNATREYGLSYPSQ 126

  Fly   133 FDFIDAAEGIRKMQATYQMFSSDIAKGLLDGVQYNSSLKPIDCLAIGLHLMNNSRWYAAEQWISA 197
            .|...||..:.::|:||::..:.:|:|:|:||:|.|.:...||..:|..|.....:...:.|:..
  Fly   127 EDVEGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRE 191

  Fly   198 SIEAYDQKSSQTDMEL--LRGPKLADLCRILGQVQMKQRNHEGALQ-AYQVALKLSPHDPEIYEE 259
            |:|...:::|.....|  ..||....|.::  :...|.....|... |::::.::...||:....
  Fly   192 SMERLRRQTSHAPSHLAPTSGPDTVTLNKM--EATAKSLFQLGDFDTAFELSQRVLQFDPKRIRN 254

  Fly   260 YRILEKRDLTLSDIEPIEQDKDN-----SHERLVLPPCCSGRCQVPRNLSNLYCVYNHVTSPFLQ 319
            :.:.:|......||:.:...|.:     |.|.......|.|... |.....|.|.|:....|:..
  Fly   255 WHLGDKGTAPPEDIDDVYLPKHSDSYSLSQEFAKYEKVCRGEVH-PIVRQELRCRYSRGNHPYRF 318

  Fly   320 LAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPSATTDPDASDDETQVDTYRTSKSVW 384
            |||:|.|..|:||:|...||::|..:.:.:|..:...|..| |.:| ....:.:...:|.||:.|
  Fly   319 LAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRS-TVNP-LPGGQLKKSAFRVSKNAW 381

  Fly   385 YSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDMLLSEKNRFNGTSDRIATT 449
            .:.:.:.|...:...|.||||||....|..||.|||:||.:|.|.|......:......:||||.
  Fly   382 LAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFRDPNHYPAEEGNRIATA 446

  Fly   450 LFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGSKWVMSKWIN 514
            :|||:||.|||.|.||.|::.|.||.|:.||||||....:....:.|.||||:.||||:.:.||:
  Fly   447 IFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGCPVLKGSKWIGNVWIH 511

  Fly   515 DMGQEFTRPC 524
            ::.|.|.|||
  Fly   512 EVTQTFARPC 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 28/130 (22%)
TPR repeat 175..200 CDD:276809 5/24 (21%)
TPR_16 176..254 CDD:290168 13/80 (16%)
TPR repeat 219..249 CDD:276809 4/30 (13%)
TPR_2 220..253 CDD:285020 4/33 (12%)
P4Hc 342..513 CDD:214780 64/170 (38%)
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 28/130 (22%)
P4Hc 341..511 CDD:214780 65/171 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461807
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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