DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and PH4alphaMP

DIOPT Version :9

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster


Alignment Length:562 Identity:154/562 - (27%)
Similarity:255/562 - (45%) Gaps:81/562 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLFWRLVLLGMLYLSLSFGQLRENNA--QQRFARSVVNMDDMLNLEDDLVSNVEKLAEALARKAK 63
            ||..:.||..:|.:....|:...:.:  .:.|...||.:.::.|    .|:.:.:.||||..:..
  Fly     1 MLLAKCVLFLVLQVLSCHGEFFSSTSGLAKLFETEVVLLAELQN----YVNEINQHAEALQSEID 61

  Fly    64 TIKWGVFKMMKRRQEYKSSM----EIFANPIDTFSLIRHMQSNWLMW----------LLYLETPV 114
            .|          |.|:.::.    :...||::.|.||:.:.|:|..:          ..||:|..
  Fly    62 AI----------RVEHLNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMA 116

  Fly   115 G-QEELFFVDSRMPLLPKYFDFIDAAEGIRKMQATYQMFSSDIAKGLLDGVQYNSSLKPIDCLAI 178
            . :|.|.|        |...||:.:|..:.::|.|||:..:::|.|:|:||:|.:::...||..:
  Fly   117 SLKENLSF--------PSQDDFVGSAIALTRLQQTYQLDVAELASGILNGVKYGTAMSWQDCFVL 173

  Fly   179 GLHLMNNSRWYAAEQWISASIEAYDQKSSQTDMELLRGPKLADLCRILGQVQMKQRNHEGALQAY 243
            |.||.....:.....|:..|::...::|..::...|      |....:.:...:...||.||...
  Fly   174 GQHLYALRDYNHTVPWLQQSMQLLGEQSYGSESASL------DFMEAVVEYHREMGAHESALSLV 232

  Fly   244 QVALKLSPHDPEIYEEYRILEKRDLTLSDIEPIEQDKDNS-------------HE----RLVLPP 291
            ...|.:.|.     :...:||.|    ..:|.:..|.|.:             ||    |:....
  Fly   233 NHVLSIEPD-----QRSHLLEAR----QQLEELITDGDKNGLLHLTARRPGDYHESREFRMYEQV 288

  Fly   292 CCSGRCQVPRNLSNLYCVYNHVTSPFLQLAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEH 356
            |......:|....||.|   .:....|..||.|.|.|.:||.||.||.:|..|:|..::.:::..
  Fly   289 CRGELAPLPSKQRNLRC---RLRKSRLGYAPFKLEELHLDPLVVQLHQVIGSKDSDSLQKTARPR 350

  Fly   357 MLPSATTDPDASDDETQVDTYRTSKSVWYSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGL 421
            :..|.......:...|.. .:|||:...::...|..||.::..:||.:||:|:..|..||.|||:
  Fly   351 IKRSTVYSLGGNGGSTAA-AFRTSQGASFNYSRNAATKLLSRHVGDFSGLNMDYAEDLQVANYGI 414

  Fly   422 GGFFETHLDML----LSEKNRFNGTSDRIATTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWY 482
            ||.:|.|.|..    :.::...:|  :|:||.::||.:|..||||.||.|.|.|.|:.||.||||
  Fly   415 GGHYEPHWDSFPENHIYQEGDLHG--NRMATGIYYLADVEAGGGTAFPFLPLLVTPERGSLLFWY 477

  Fly   483 NLDTKGNDHMGSLHTGCPVIVGSKWVMSKWINDMGQEFTRPC 524
            ||...|:....:.|..|||:.||||:.:.||.:..|:..|||
  Fly   478 NLHPSGDQDFRTKHAACPVLQGSKWIANVWIRERNQDNVRPC 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 34/142 (24%)
TPR repeat 175..200 CDD:276809 6/24 (25%)
TPR_16 176..254 CDD:290168 14/77 (18%)
TPR repeat 219..249 CDD:276809 6/29 (21%)
TPR_2 220..253 CDD:285020 7/32 (22%)
P4Hc 342..513 CDD:214780 60/174 (34%)
PH4alphaMPNP_524594.2 P4Ha_N 24..156 CDD:285528 35/153 (23%)
P4Hc 336..509 CDD:214780 61/175 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461827
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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