DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaNE2 and PH4alphaSG2

DIOPT Version :10

Sequence 1:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster


Alignment Length:567 Identity:157/567 - (27%)
Similarity:267/567 - (47%) Gaps:76/567 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLFWRLVLLGMLYLSLSFGQLRENNAQQRFARSVVNMDDMLNLEDDLVSNVEKLAEALARKAKTI 65
            ||....:.:|:..|.:..|.     |...|..||.:|.|:..:|::|::......|:..::....
  Fly     1 MLDRHCLYIGIFQLIIWVGV-----ANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFY 60

  Fly    66 KWGVFKMMKRRQEYKSSM----EIFANPIDTFSLIRHMQSNW--LMWLLYLETPVGQEELFFVD- 123
            :..| :.:||..|:.:|.    :...:|:..|.||:.:..:|  |::...|.....:|...||: 
  Fly    61 RRYV-EQIKREHEWATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEV 124

  Fly   124 -SRMPLLPKYFDFIDAAEGIRKMQATYQMFSSDIAKGLLDGVQYNSSLKPIDCLAIGLHLMNNSR 187
             ||....|...:...|.:|:.::|..|.:.:||:|.|::.|:.|.|.|:..:|..||:.|.:...
  Fly   125 LSRDLGYPDQSELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGE 189

  Fly   188 WYAAEQWISASI--------EAYD---------QKSSQTDMELLRGPKLADLCRILGQVQMKQRN 235
            :..:.:|:..:.        |..|         :.:|..:.| |..||.|  .|:|.|:...|..
  Fly   190 YQRSLEWLQVAFILLRNSPREEKDADHYLSDIREYASMANFE-LGNPKKA--ARLLSQILESQPT 251

  Fly   236 HEGALQAYQVALKLSPHDPEIYEEYRILEKRDLTLSDIEPIEQDKDNSHERLVLPPCCSGRCQVP 300
            |             |....:.|.|.|:..|      :::..:....:::.||     |.|| ::|
  Fly   252 H-------------SAQQTQKYLESRVPGK------NVQETKPSWFSNYTRL-----CQGR-RLP 291

  Fly   301 RNLSN--LYCVYNHVTSPFLQLAPIKTEILSIDPFVVLLHDMISQKE-STLIRTSSKEHMLPSAT 362
            ...|.  |.|..:.....:..|||::.|.:.:||.:.:.|.|:|.|: .::...:.||.|:.||.
  Fly   292 EERSGDPLRCYLDGKRHAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAV 356

  Fly   363 TDPDASDDETQVDTYRTSKSVW--YSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFF 425
            .   .|..|..|...|.|:..|  |.|...::..:|.:.:   :|.||...|..||.|||:||.:
  Fly   357 A---GSGGEGTVRDLRVSQQTWLDYKSPVMNSVGRIIQFV---SGFDMAGAEHMQVANYGVGGQY 415

  Fly   426 ETHLDML-LSEKNRFNGTSDRIATTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGN 489
            |.|.|.. ::....|.|  |||:|::|||::|.|||.|.|.:||:.:.|..|:.:.|:||....:
  Fly   416 EPHPDYFEVNLPKNFEG--DRISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLH 478

  Fly   490 DHMGSLHTGCPVIVGSKWVMSKWINDMGQEFTRPCVESSLSSNEVLS 536
            ....:||.|||||||||.:.:.|::...|||.|||   :|:|:...|
  Fly   479 VDARTLHAGCPVIVGSKRIGNIWMHSGYQEFRRPC---NLTSDSYKS 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaNE2NP_733378.1 P4Ha_N 33..163 CDD:462433 33/137 (24%)
TPR repeat 175..200 CDD:276809 5/32 (16%)
TPR_16 176..254 CDD:433202 18/94 (19%)
NrfG 217..>260 CDD:443378 10/42 (24%)
TPR repeat 219..249 CDD:276809 6/29 (21%)
P4Hc 342..513 CDD:214780 63/174 (36%)
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433 33/137 (24%)
CpoB <178..263 CDD:441335 19/100 (19%)
P4Hc 335..503 CDD:214780 64/175 (37%)

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